Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04551 ATGAACAAGGAGGAGAAAGAAGAATTTGTTGGGCAAATTGAAATATGGAAGTACATGTTGTGCTTCACAGACTCTTTTGCACTAAAATGTGCTGTGGAACTGCGCATAGCTGACATAATAGACCGTTATGGTAAACCACTGTCTTTGTCTCAAATTGCAGCGAACATTGAAGATGCACCCTCCCCTGAAGTTTCCATGCTGCAAAGAATCCTGACAGTGATGGTGCGGAGAAAGATCTTTAGTGCAGAGAAGTCAGAGAGCGGAGAGACTCTTTATGGTATGACACATGCTTCAAAATGGATCCTAAGGGACACCAAAATGACATTAGCACCTTTGGTGTTGCTAGAGAACCACCCAATCCATTTGAACCCTGCTCACTATATTAGTGACTGTGTCAGGGAAGGTTACAAAAATGGCACTCCTTTCTTTAGGTGCCATGGCCATGATCAATTTGAATTGACAGGGGTGGACGCGGATTTCAATAGGTTATTCAATGAGGGTCAAGTTTGTACGGCCAGGATTGTGTCCAAGGCTGTGATCTCAGGATACAAAGATGGGTTCAAGCAGATTGAATCATTGGTTGATGTTGGAGGTGGTATTGGGGGTTCACTCTTTGAGATTGTGAGAGCCTACCCACACATCAAAGGCATTAACTTTGACTTGCCTCATGTCGTTGCCACTGCACCCAAGTACGATGGAATCACCCATGTTGGAGGTGATATGTTTGTATCCATTCCTAATGCTGATGCTATTTACATGAAGTGGATTCTACATGACTGGAGTGATGAACTCTGCATAAAGATTTTAAAGAACTGCAGGAAGTCAATACCAGAGAAAACGGGAAAGGTGATCATTGTGGATCATGTTCTAGATCCGGAAGGGAATGAACCATTTACTGACGCTGGTATTGCGTTTGATATGTTGCTGCTTGCACACAACGCGGGTGGAAAGGAAAGGACCGCGGAGAATTGGAAAATTCTATTCAAAGATGCAGGATTCGCGCGTTATAACATCATCAAGATCAATGCCATGCCATCCATCATTGAGGCATTTCCAATCTAA 1062 0.4341 MNKEEKEEFVGQIEIWKYMLCFTDSFALKCAVELRIADIIDRYGKPLSLSQIAANIEDAPSPEVSMLQRILTVMVRRKIFSAEKSESGETLYGMTHASKWILRDTKMTLAPLVLLENHPIHLNPAHYISDCVREGYKNGTPFFRCHGHDQFELTGVDADFNRLFNEGQVCTARIVSKAVISGYKDGFKQIESLVDVGGGIGGSLFEIVRAYPHIKGINFDLPHVVATAPKYDGITHVGGDMFVSIPNADAIYMKWILHDWSDELCIKILKNCRKSIPEKTGKVIIVDHVLDPEGNEPFTDAGIAFDMLLLAHNAGGKERTAENWKILFKDAGFARYNIIKINAMPSIIEAFPI. 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04551 353 Pfam O-methyltransferase domain 127 334 IPR001077 GO:0008171
Seca3g04551 353 PIRSF O-mtase 1 353 IPR016461 GO:0008168
Seca3g04551 353 Gene3D - 1 101 IPR036388 -
Seca3g04551 353 FunFam O-methyltransferase family protein 103 351 - -
Seca3g04551 353 SUPERFAMILY "Winged helix" DNA-binding domain 7 104 IPR036390 -
Seca3g04551 353 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 16 352 IPR016461 GO:0008168
Seca3g04551 353 Gene3D Vaccinia Virus protein VP39 103 353 IPR029063 -
Seca3g04551 353 Pfam Dimerisation domain 27 75 IPR012967 GO:0046983
Seca3g04551 353 CDD AdoMet_MTases 193 290 - -
Seca3g04551 353 PANTHER O-METHYLTRANSFERASE 12 335 IPR016461 GO:0008168
Seca3g04551 353 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 107 350 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04551 Seca-Chr3 89050107 89051680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04551 26 339 Monolignol Biosynthesis Gene Families AT5G54160 40.312 1.48e-77 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04551 K22588 - gmx:100800801 619.387