Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04539 ATGGCGAATGTGGCAATTATTGAGCTTGACAGAAACTGTGCTAAGACGGTTGAAGAGATTGTGAAATTGGAGAGAAAGATCTTTCCCAAACACGAATCACTCGCTTCCTTCTTTCACGATGAACTGAGAAAAAAGAATAGTGGATTGCTTTACCTTCAAGTGGATGGAGAACTTGCAGGCTATGTCATGTATTCTTGGCCTTCTTCCTTGTATGCCTCTATCACCAAGCTCGCAGTGAAGGAGCAAAGGAGGAAGCAAGGCCATGGAGAGGCTCTACTGAAAGCGGCAATTCAGAAATGCAGGACAAGGAAAGTTTCGCGCATAATGCTTCACGTGGATCCCTTGAGAACCCCTGCACTGAATCTTTACAAGAAACATGGTTTCCAAGTTGACAGTTTGATTGAAGGCTACTACTCCTCAGACAGAAATGCCTATAGAATGTACTTAGACTTTGATTCCAGTTGA 465 0.4344 MANVAIIELDRNCAKTVEEIVKLERKIFPKHESLASFFHDELRKKNSGLLYLQVDGELAGYVMYSWPSSLYASITKLAVKEQRRKQGHGEALLKAAIQKCRTRKVSRIMLHVDPLRTPALNLYKKHGFQVDSLIEGYYSSDRNAYRMYLDFDSS. 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04539 154 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 3 153 - -
Seca3g04539 154 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 15 151 IPR016181 -
Seca3g04539 154 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 4 152 IPR000182 GO:0016747
Seca3g04539 154 Pfam Acetyltransferase (GNAT) family 20 128 IPR000182 GO:0016747
Seca3g04539 154 CDD NAT_SF 55 111 - -
Seca3g04539 154 Gene3D - 6 150 - -
Seca3g04539 154 Coils Coil 6 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04539 Seca-Chr3 88875744 88877401 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca3g04539 Acetyltransf_1 1.3e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04539 - - gmx:100808090 278.485