Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04529 ATGGGTTGGAAGAGATCTGCTTTGGAGTACAAGAGAGTTAAGATCTATGGACAAGTTCTATTCGGATTTTTGTTGATCTGCACAATTCAGATTTCAAGTGCACTCACTGATCCCACTGATGTTGCTGCAATTAATAGCTTATATGCTGCACTGGGATCCCCTGTTCTCCCTGGGTGGGTTCCTAGTGGCGGAGATCCATGCGGACAAGGGTGGCAAGGCGTTCAATGTAATGGTTCATTCATACAAAAAATAGTTCTGAATGGTGCAAATTTGGGAGGAGAACTGGGTGATAATCTGGCAACATTTGTTTCCATCACAGTAATTGAGCTAAGCAACAACAACATCGGAGGAAGTATTCCGTCCAATTTGCCAGTTTCCTTGAAAAACTTTTTTCTTTCAGGCAACCAGTTCACTGGAAGTATTCCGGCCTCTTTATCCACTCTAACTGGACTAACAGACATGTCTCTTAATGAAAATCATTTATCTGGAGAAATACCAGATGCATTTCAGTCACTTACACAATTGATCAATCTAGATTTATCTAATAATAATTTGAGTGGGGAATTGCCTCCTTCGGTGGAGAATTTATCAGCTCTGACCACCCTACACATACAGAACAATCAATTGTCTGGGACACTTGATGTTTTACAAGACCTTCCTCTGAAAGATTTGAATATTGAGAACAACCAGTTTGCTGGCCCAATACCTCCAAAGTTGCTAAGCATCCCTAATTTCAGACAAGCTGGAAACCCTTTTAATAATAATGCTACTGCAACTCATGCTCCTCCACCTCGCTCTCCAGTGACAGCACCAGCACCGCCAGGAACACCAGTTTCTGGGGTACCATCTTCTGGCCGTGTACCTACTAAACAGGCTGATGGACCAACAGTAACAAATGAATCAAATTCTGGGAAATCCAATAAAAACACCAAAAGGGTGGTTTGGATATCTATTGCTAGTGTATTGGGATTCATTATTTTGGTACTAGCACTCATACTATTTGTTCCAAGATGTGGCAGAAGGGAACATGTTGACAGAAGGTCCAAGCGACATCAAATTGGTGCATATGGAGGTGAAAGACAAAATGCTAGGGATTATGGGGCTATAGTCCAACCACCTATACCAATAGGGGAGGTTTCAAGGCCTAAAGAGGATAATCAAGCAGAGGCCAGGAGAGTGTGGGCTATTCCAAATCGACAGGGTGAGCGAGAGAAGGATGTGCAAAGAATGGCACCTACACCAAAGAGGGGAGATCATGAGATCGATATGAGTACCCTAGAAGTGTATTCAATGCCTCCTCCTCCTCCACCTCCTCCTCCCCCTCCACCTCCTCCGCCGCCTCCTCCCCCTCCGCCTCCTCCGCCTCCTCCTCCTCAGAAGGTGATCGTTGAGCCAGTCACTTTCCACAGAGGGACTAATGTCAGTCCATCCAGAAGTTCAGTTCCTCCTCCCACTTTTGCAAAAGCTTTCACCATTGCATCCCTTCAACAGTATACAAATAGCTTTTCTCAAGAAAATCTTATAGGAGGAGGCATGCTGGGAAGCGTGTATAGGGCAGAGCTTCCTAATGGGAAGCTACTTGCTGTAAAGAAACTGGACAAGAGAGCCTCTGATCACCAGAAGGATGATGAGTTTCTTGAATTGGTAAATGCTATTGACAGAATACGACATGCTAATGTTGTTGAGCTAATTGGATACTGTTCAGAACATGGTCAAAGGCTTCTGATCTATGAGTACTGCAGTAATGGGTCACTGTATGATGCACTCCACTCTGATGATGAAATCAGAACAAGACTCTCATGGAATACTCGCATACGGATAGCACTTGGGGCAGCTAGAGCCTTAGATTCTTATTGTCCTTTAACAAGATATTTGCATGAGCTATGTCATCCGCCTGTGATACATAGAAATTTGAAGTCTGCCAATATTCTCCTTGATGATGATCTATCTGTGCGTGTATCTGATTGTGGTTTAGCTCCATTGATAGCTTCCGGATCTGTAAGTCAGCTCTCTGGGAACCTGCTAACAGCTTATGGCTATGGAGCTCCAGAATTTGAGTCAGGAATTTACACATACCAAAGTGATGTATACAGCTTTGGAGTGATTATGTTAGAGCTTTTGACTGGCCGTCAGTCCCTTGACAGGACACGTCCCCGAGGGGAGCAATTTCTTGTCAGATGGGCAATTCCCCAACTTCATGATATTGATGCATTATCAAGCATGGTTGATCCTTCTTTAAATGGAGATTACCCTGCAAAATCATTGTCAAATTTTGCAGACATTATTTCTCGATGCCTTCAGTCGGAGCCAGAATTTAGGCCAGCAATGTCAGAAGTCGTTCTATACTTGATAAATATGATAAAGAGGGAGTCTCAGCAAAGTGAATCAAATGAAATATGA 2400 0.435 MGWKRSALEYKRVKIYGQVLFGFLLICTIQISSALTDPTDVAAINSLYAALGSPVLPGWVPSGGDPCGQGWQGVQCNGSFIQKIVLNGANLGGELGDNLATFVSITVIELSNNNIGGSIPSNLPVSLKNFFLSGNQFTGSIPASLSTLTGLTDMSLNENHLSGEIPDAFQSLTQLINLDLSNNNLSGELPPSVENLSALTTLHIQNNQLSGTLDVLQDLPLKDLNIENNQFAGPIPPKLLSIPNFRQAGNPFNNNATATHAPPPRSPVTAPAPPGTPVSGVPSSGRVPTKQADGPTVTNESNSGKSNKNTKRVVWISIASVLGFIILVLALILFVPRCGRREHVDRRSKRHQIGAYGGERQNARDYGAIVQPPIPIGEVSRPKEDNQAEARRVWAIPNRQGEREKDVQRMAPTPKRGDHEIDMSTLEVYSMPPPPPPPPPPPPPPPPPPPPPPPPPPPQKVIVEPVTFHRGTNVSPSRSSVPPPTFAKAFTIASLQQYTNSFSQENLIGGGMLGSVYRAELPNGKLLAVKKLDKRASDHQKDDEFLELVNAIDRIRHANVVELIGYCSEHGQRLLIYEYCSNGSLYDALHSDDEIRTRLSWNTRIRIALGAARALDSYCPLTRYLHELCHPPVIHRNLKSANILLDDDLSVRVSDCGLAPLIASGSVSQLSGNLLTAYGYGAPEFESGIYTYQSDVYSFGVIMLELLTGRQSLDRTRPRGEQFLVRWAIPQLHDIDALSSMVDPSLNGDYPAKSLSNFADIISRCLQSEPEFRPAMSEVVLYLINMIKRESQQSESNEI. 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04529 799 MobiDBLite consensus disorder prediction 373 462 - -
Seca3g04529 799 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 81 780 - -
Seca3g04529 799 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Seca3g04529 799 MobiDBLite consensus disorder prediction 243 307 - -
Seca3g04529 799 SUPERFAMILY L domain-like 36 244 - -
Seca3g04529 799 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 469 579 - -
Seca3g04529 799 MobiDBLite consensus disorder prediction 282 307 - -
Seca3g04529 799 MobiDBLite consensus disorder prediction 264 278 - -
Seca3g04529 799 Pfam Leucine rich repeat 126 185 IPR001611 GO:0005515
Seca3g04529 799 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 37 264 - -
Seca3g04529 799 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 580 797 - -
Seca3g04529 799 SUPERFAMILY Protein kinase-like (PK-like) 475 783 IPR011009 -
Seca3g04529 799 MobiDBLite consensus disorder prediction 246 262 - -
Seca3g04529 799 ProSiteProfiles Protein kinase domain profile. 502 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g04529 799 Gene3D Transferase(Phosphotransferase) domain 1 580 799 - -
Seca3g04529 799 Gene3D Ribonuclease Inhibitor 35 261 IPR032675 -
Seca3g04529 799 Gene3D Phosphorylase Kinase; domain 1 472 579 - -
Seca3g04529 799 MobiDBLite consensus disorder prediction 382 423 - -
Seca3g04529 799 Pfam Protein tyrosine and serine/threonine kinase 505 781 IPR001245 GO:0004672|GO:0006468
Seca3g04529 799 MobiDBLite consensus disorder prediction 429 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04529 Seca-Chr3 88653474 88663010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04529 31 794 Strubbelig Receptor Gene Family AT4G03390 62.145 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Seca3g04529 PK_Tyr_Ser-Thr 3.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04529 - - mtr:25492087 1138.25