Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04524 ATGGGAGAAGATTTGTCTTCAATGAGCCTCAAGGAACTTCAGTGTCTGGAGCAGCAGTTAGATACTTCTCTCAAGAATATCCGTACTGGCAGATGCGAGTACAACCAAGTGATGTACGAGTCCATTTCTGAGCTTCAGAAAAAGGAGAAAGGGATACAAGAGCAGAATAACATGCTCGCAAAGAAGGTGAGTAAGAATATCTCCCTTTACAAACTCTTAATTTGCATCTAA 231 0.4113 MGEDLSSMSLKELQCLEQQLDTSLKNIRTGRCEYNQVMYESISELQKKEKGIQEQNNMLAKKVSKNISLYKLLICI. 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04524 76 ProSiteProfiles K-box domain profile. 1 69 IPR002487 GO:0003700|GO:0005634|GO:0006355
Seca3g04524 76 Pfam K-box region 1 63 IPR002487 GO:0003700|GO:0005634|GO:0006355
Seca3g04524 76 Coils Coil 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04524 Seca-Chr3 88583884 88585241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04524 1 63 MADS-box Gene Family AT1G69120 69.841 6.64e-23 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04524 K09264 - gmx:100810129 96.2857