Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04519 ATGGCGAATGGGTTGGAGAGGGAGAGTGAGTTCACAATGTTCAGTGAGGAGGAGCTGAGCGAGGTGAGTGGGGTGAAGCGTGTTGGTGACTATGTGGAAGTGATGTGTGGGTGTACCAGCCATAGATATGGTGACGCTGTTGGAAGGCTTAGGGTTTTCGTTAATGGGTACCTCGAAATCACTTGTGAATGCACCCCTGGTTGCCAAGAAGACAAGTTGACTCCCTCTGCATTTGAGAAACACTCTGGAAGAGAGACAGCCAGGAAATGGAAGAATAATGTGTGGGTAATAGTGAATGGTGAGAAGGTTCCATTGTGTAAAACAGTGCTGCTCAAATACTACAACCAAGTGTCAAAAGCTGCTAATGGGTCTCATAGATCCCAAAATGGTCGGGCTTGTCACCGTGATGAGTTTGTTCGTTGTACTAGATGCAACAAAGAGCGTAGGTTCCGTCTAAGGACTAAAGAGGAATGCCGCACTCACCATGATGCTGTGGCAGATGCAAATTGGAAATGTTCTGATCTGCCATATGACAAAATCACATGTGATGATGATGACGAACGAGCAAGTCGTAGAGTTTACAGGGGATGCACCCGCTCTCCAACATGCAAAGGTTGCACTTCTTGTGTGTGCTTTGGGTGTGATATCTGCCGTTTTTCAGATTGCAGCTGCCAGACTTGTACTGACTTTACAAGCAATGCCAAAGCTTGA 711 0.4669 MANGLERESEFTMFSEEELSEVSGVKRVGDYVEVMCGCTSHRYGDAVGRLRVFVNGYLEITCECTPGCQEDKLTPSAFEKHSGRETARKWKNNVWVIVNGEKVPLCKTVLLKYYNQVSKAANGSHRSQNGRACHRDEFVRCTRCNKERRFRLRTKEECRTHHDAVADANWKCSDLPYDKITCDDDDERASRRVYRGCTRSPTCKGCTSCVCFGCDICRFSDCSCQTCTDFTSNAKA. 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04519 236 Gene3D - 30 127 IPR010919 -
Seca3g04519 236 ProSiteProfiles SAND domain profile. 17 105 IPR000770 GO:0003677
Seca3g04519 236 PANTHER PROTEIN ULTRAPETALA 1 10 235 IPR020533 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04519 Seca-Chr3 88546467 88552973 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Seca3g04519 SAND 7.9e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04519 - - gmx:100796203 487.263