Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04466 ATGTCTGAATTGGACGTACAAATCCCAACTACTTTTGATCCCTTTGCTGAGGCAAATGCTGAGGACTCAGGAGCTGGGACAAAAGAGTATGTTCATGTTCGTGTACAACAGCGTAATGGAAGGAAAAGCCTAACAACCGTTCAAGGATTAAAGAAAGAGTACAGCTATACCAAGATACTCAAGGACTTGAAGAAAGAATTCTGCTGTAATGGTACTGTTGTCCAGGACCCTGAGTTGGGCCAGGTCATACAACTCCAGGGAGATCAAAGAAAAAATGTTTCTACTTTCCTTGTGCAGGCGGGCATAGTAAAGAAGGAGCATATCAAGATTCATGGTTTTTAA 342 0.4211 MSELDVQIPTTFDPFAEANAEDSGAGTKEYVHVRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKIHGF. 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04466 113 SUPERFAMILY eIF1-like 4 113 IPR036877 GO:0003743|GO:0006413
Seca3g04466 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Seca3g04466 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Seca3g04466 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 6 113 - -
Seca3g04466 113 Gene3D - 1 113 - -
Seca3g04466 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Seca3g04466 113 FunFam Eukaryotic translation initiation factor SUI1 2 113 - -
Seca3g04466 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Seca3g04466 113 NCBIfam translation initiation factor SUI1 5 113 IPR005874 GO:0003743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04466 Seca-Chr3 87810652 87812021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04466 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 92.035 8.68e-77 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04466 K03113 - qsu:111988426 223.787