Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04464 ATGGGAAGCCAGAGTTACTTGAGGGCTTTAATTATTTGTCTTATAGCATTAATTGGATCAACTCAAGCTCAATTGCAGCTGGGTTTCTATGCTAAAAGCTGCCCAAAGGCTGAGCAAATCGTTTTGAAGTATGTTTTTGAGCATATCCCCAATGTCCCATCAATGGCTGCTGCCCTCATAAGAATGCACTTCCATGACTGTTTTGTCAGGGGCTGTGATGGATCAGTGCTTCTGAACTCAACAAAAACCAATCAAGCTGAAAAGGACTCTATTCCAAATCTTACACTCCGAGGCTTTGATGTCATTGACAAAATAAAGAGCCTTATTGAAGCTGAATGCCCTGGGGTAGTCTCTTGTGCTGATATCTTAGCTTTGACGGCCAGAGACTCTGTCCATGCCATTGTAAGTACTACTCATGGTGGACCTTATTGGAATGTTCCAACAGGTAGAAGGGATGGGGTCATATCTAAAACAGCAGATGTCTTTCTTAGCCTTCCTGCTCCATTTCACAACCTCACCACCCTCATAACTCTCTTTGCCAATGTTGGACTTGATGTAAATGATCTGGTCTTGCTCTCTGGTGCTCACACAATTGGTATTTCTCATTGCTCAACAATTGCAAACAGGCTATATAATTTTACTGGCAAGGGTGATCAAGACCCTGATCTAGACAGTGAATATGCAAAAAATCTCAAGACCTTGAAGTGCAAGAGTATCACTGATCAAACCACACTTATTGAGATGGACCCTGGAAGCCGCAACACATTTGATCTTGGCTATTACAATCAAGTAGTTAAGAGAAGGGGCTTGTTCCAATCAGATGCTGAACTGCTCAAAAGCTCTAGTACAAGGTCTATTATTGCCCGTCAGCTTAAGTCAACTCAAGGATTCTTTGTTGAATTTGCCAAGTCCATGGAGAAAATGGGCCGTATCAATGTCTTGACTGGGACTCAAGGAGAGATCAGGAAGCATTGTGCGTTAGTAAACTGA 990 0.4242 MGSQSYLRALIICLIALIGSTQAQLQLGFYAKSCPKAEQIVLKYVFEHIPNVPSMAAALIRMHFHDCFVRGCDGSVLLNSTKTNQAEKDSIPNLTLRGFDVIDKIKSLIEAECPGVVSCADILALTARDSVHAIVSTTHGGPYWNVPTGRRDGVISKTADVFLSLPAPFHNLTTLITLFANVGLDVNDLVLLSGAHTIGISHCSTIANRLYNFTGKGDQDPDLDSEYAKNLKTLKCKSITDQTTLIEMDPGSRNTFDLGYYNQVVKRRGLFQSDAELLKSSSTRSIIARQLKSTQGFFVEFAKSMEKMGRINVLTGTQGEIRKHCALVN. 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04464 329 Gene3D - 28 329 - -
Seca3g04464 329 SUPERFAMILY Heme-dependent peroxidases 24 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca3g04464 329 CDD secretory_peroxidase 24 328 IPR033905 GO:0004601|GO:0042744
Seca3g04464 329 PANTHER PEROXIDASE 25-RELATED 15 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g04464 329 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Seca3g04464 329 ProSiteProfiles Plant heme peroxidase family profile. 24 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g04464 329 FunFam Peroxidase 28 169 - -
Seca3g04464 329 FunFam Peroxidase 166 308 - -
Seca3g04464 329 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g04464 329 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g04464 329 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g04464 329 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g04464 329 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g04464 329 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g04464 329 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g04464 329 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g04464 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Seca3g04464 329 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g04464 329 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g04464 329 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g04464 329 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g04464 329 Gene3D Peroxidase, domain 2 166 308 - -
Seca3g04464 329 Pfam Peroxidase 50 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04464 Seca-Chr3 87738534 87740733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04464 14 329 Peroxidase AT1G05260 64.038 1.78e-150 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04464 K00430 - gmx:100785662 532.332