Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04354 ATGAGTGATGAGTATGTAAGATCTGCTCTTGATTATGTAGCAAATCAGAAGGATATAAATTTGTTGAGGGACACTTTTTATAACTCTGCAGGGAAAGAGGGGAAATTCAGGGGAGACCCAAATTTATATGTGGTTGGTTGGGCTAATTTTGCATTTTATGCCACTGATTTTGGGTGGGGAAAACCTGTTTGTTTGGTTCCTGGGGGCATTAATTCTGATGGTAAGGCTTTCATTCTTAATACATGA 246 0.3862 MSDEYVRSALDYVANQKDINLLRDTFYNSAGKEGKFRGDPNLYVVGWANFAFYATDFGWGKPVCLVPGGINSDGKAFILNT. 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04354 81 Gene3D - 1 81 IPR023213 -
Seca3g04354 81 Pfam Transferase family 2 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04354 Seca-Chr3 84834140 84834385 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04354 1 79 Monolignol Biosynthesis Gene Families AT5G48930 37.975 1.59e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04354 K13065 - gmx:100819383 127.872