Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04336 ATGGGTCGACTCGATGAGTCCAAGGGTTCTATATCACCTCGAGATGACGATGGTCATGGCACCCATACTGCAAGCACAGCTGCAGGGTCTCTGGTGCAAAACGCGAGCCTTTTTGGCTATGCTATTGGAACTGCACGTGGGATGGTCCCGAGCGCTAGAGTCGCTATGTACAAGGTTTGTTGGAATGAATCTTGTGCCGTTTCTGATATATTGGCTGCAATTGACCAAGCCATCATTGATAATGTCAATATCATTTCCATTTCACTTGGTGGTGAACAATCTGAGTACTATGATGACCCTGTCGCAATCGCAGCCTTTTCGGCAATGGAGCATGGGATTATAGTCTCTTGCTTTGCAGGAAACGAGGGTCCTGTACCTGGCAGTACTACGAATGTAGCACCTTGGATGATCACCGTGGGAGCTGGCACACTCGATCGAGATTTTCCTGCATACATTAGCCTAGGAAATGGAAAGAATTATTCTGGAGTGTCCCTTTATAATGGAAATAATCCTTTGCCAAATCATCCATTACCGTTCATATACGCAGGCAATGCAAGCAAAGAAAGGTCCTCCAAGTTTAATTCTAGATTGTGCTTGCCGGATAGCTTGGCGCCAGAAAAAGTTAAGGGAAAGATTGTGTTGTGTGATTACGAACAAGGTAGTAGGATAGAAAAAGGAAATACGGTGAAATCGATTGGCGGTTTGGGCATGGTGTTGGCTAATAATGTCGCTGAAGGAGATGAACTATTGCCAGATTCCAATATTTTGCCTGAAACTTTGGTGGGCTCAAAAGAAGGTAATGCCATCAAGCAATACTTGTTTTCTAATCCAAAATCGATGGGTACAATTGTATTTCAGGGAACAAAGCTTGGAATTGAGCCATCACCGGTTGTTGCATCATTCAGCTCTCGAGGCCCTAATGTTATCACCCCAAAGATACTAAAGCCTGATTTGATTGCGCCAGGTGTCAACATCTTAGCAGCATATTCAAGAAATTTAGATGATAGGCGTGTGGACTTCAACATCATCTCAGGCACGTCCATGTCATGCCCTCATGTGAGTGGGCTAGCGGCTCTAGTCAAATTAGTTCATCCAAATTGGAGCCCAGCTATGATTCGATCTGCATTGATGACTACGAGTTATACGACTTACATGAATGGTCAGCCATTGTTGGACAGTGCCAACAAAAAACCAGCAACGCCGTTTGATTATGGTGTCGGACACGTGGACCCTGTTCCTGCACTTAATCCAGGACTGGTTTATGATCTGACAGTGGATGATTATCTAAGCTTCCTCTGTGCGTTGAACTACACAGCCAATGATATCGAAGTGGTGGTGAGGAGAAAGTATAAGTGTGACCCAAACAAACAATACAACGTAACAAACCTTAATTACCCTTCATTTGCTGTGGTGTTTGGTCCAACAAATGTTAAACACATGCGAACTCTTACCAATGTGGGGCCTGCAGGAACATACAAGGTATCAGTTAAGTTAGATATCCCAGATGTTAAGATCTCAGTTGAGCCGGAAGTGCTGAGTTTCAAGGAAACAAATGAGAAAAAATCATATATAGAACAAACAAAGCTAGCTAACATGGAGATGTTTAAGAAACCTCTCGCTGTAACTCTTTTTGTTTTGATTCTGGTCTTCTGTGATGTCTCTCTGGCGAGAATGGTGAAGACAACGGAGGACCAAAAGAGTGGTTATATAGTGCTTATGTCCAAATCCCAAATGCCAACAAGCTTCCACCACCATGGGGTGTGGTATGAATCGATTTTGAAGTCGATCTCTAACTCAGCAGAAATGCTCTACACCTATAACAATGCAATTCATGGATTCTCTACAAGGATAACAACTAAAGAAACTCGATTACTAAAGAGCCAAATCGGGGATTTAAAGGTGTTGCCAGATAAACAATACAAGCTTCACACAACAAGAACCCCACAGTTCCTTGGCCTTGACAAAATCCAGGGCACGCTCCTCGAGACAACAAGCAAAGCAGGTAGTGATGTAATTGTTGGACTCCTCGATACTGGTGTCTGGCCTGAAAGCAAGAGCTTTGACGATACTGGATTTGGACCCATCCCTAGTAGTTGGAAAGGAAAATGTGAAACAGGTACCAATTTCACAACCTTGAATTGTAATAAGAAATTGATTGGAGCCAGGTTCTATCTAAAGTCCAAGGGTTCTATATCACCTCGAGATGACGATGGTCATGGCACCCATACTGCAAGCACAGCTGCAGGGTCTCTGGTGCAAAACGCGAGCCTTTTTGGCTATGCTATTGGAACTGCACGTGGGATGGTCCCGAGCGCTAGAGTCGCTATGTACAAGGTTTGTTGGAATGAATCTTGTGCCGTTTCTGATATATTGGCTGCAATTGACCAAGCCATCATTGATAATGTCAATATCATTTCCATTTCACTTGGTGGTGAACAATCTGAGTACTATGATGACCCTGTCGCAATCGCAGCCTTTTCGGCAATGGAGCATGGGATTATAGTCTCTTGCTTTGCAGGAAACGAGGGTCCTGTACCTGGCAGTACTACGAATGTAGCACCTTGGATGATCACCGTGGGAGCTGGCACACTCGATCGAGATTTTCCTGCATACATTAGCCTAGGAAATGGAAAGAATTATTCTGGAGTGTCCCTTTATAATGGAAATAATCCTTTGCCAAATCATCCATTACCGTTCATATACGCAGGCAATGCAAGCAAAGAAAGGTCCTCCAAGTTTAATTCTAGATTGTGCTTGCCGGATAGCTTGGCGCCAGAAAAAGTTAAGGGAAAGATTGTGTTGTGTGATTACGAACAAGGTAGTAGGATAGAAAAAGGAAATACGGTGAAATCGATTGGCGGTTTGGGCATGGTGTTGGCTAATAATGTCGCTGAAGGAGATGAACTATTGCCAGATTCCAATATTTTGCCTGAAACTTTGGTGGGCTCAAAAGAAGGTAATGCCATCAAGCAATACTTGTTTTCTAATCCAAAATCGATGGGTACAATTGTATTTCAGGGAACAAAGCTTGGAATTGAGCCATCACCGGTTGTTGCATCATTCAGCTCTCGAGGCCCTAATGTTATCACCCCAAAGATACTAAAGCCTGATTTGATTGCGCCAGGTGTCAACATCTTAGCAGCATATTCAAGAAATTTAGATGATAGGCGTGTGGACTTCAACATCATCTCAGGCACGTCCATGTCATGCCCTCATGTGAGTGGGCTAGCGGCTCTAGTCAAATTAGTTCATCCAAATTGGAGCCCAGCTATGATTCGATCTGCATTGATGACTACGAGTTATACGACTTACATGAATGGTCAGCCATTGTTGGACAGTGCCAACAAAAAACCAGCAACGCCGTTTGATTATGGTGTCGGACACGTGGACCCTGTTCCTGCACTTAATCCAGGACTGGTTTATGATCTGACAGTGGATGATTATCTAAGCTTCCTCTGTGCGTTGAACTACACAGCCAATGATATCGAAGTGGTGGTGAGGAGAAAGTATAAGTGTGACCCAAACAAACAATACAACGTAACAAACCTTAATTACCCTTCATTTGCTGTGGTGTTTGGTCCAACAAATGTTAAACACATGCGAACTCTTACCAATGTGGGGCCTGCAGGAACATACAAGGTATCAGTTAAGTTAGATATCCCAGATGTTAAGATCTCAGTTGAGCCGGAAGTGCTGAGTTTCAAGGAAACAAATGAGAAAAAATCATATATAGTTACATTTTCAGCAGCAAGAATGAAACCGAAGGATCATTATGGTTTTGGACGTTTAGAATGGTCAGATGGAAAACATGTTATCGGAAGTCCGATCGCAATTAGCTGGACATGA 3846 0.4337 MGRLDESKGSISPRDDDGHGTHTASTAAGSLVQNASLFGYAIGTARGMVPSARVAMYKVCWNESCAVSDILAAIDQAIIDNVNIISISLGGEQSEYYDDPVAIAAFSAMEHGIIVSCFAGNEGPVPGSTTNVAPWMITVGAGTLDRDFPAYISLGNGKNYSGVSLYNGNNPLPNHPLPFIYAGNASKERSSKFNSRLCLPDSLAPEKVKGKIVLCDYEQGSRIEKGNTVKSIGGLGMVLANNVAEGDELLPDSNILPETLVGSKEGNAIKQYLFSNPKSMGTIVFQGTKLGIEPSPVVASFSSRGPNVITPKILKPDLIAPGVNILAAYSRNLDDRRVDFNIISGTSMSCPHVSGLAALVKLVHPNWSPAMIRSALMTTSYTTYMNGQPLLDSANKKPATPFDYGVGHVDPVPALNPGLVYDLTVDDYLSFLCALNYTANDIEVVVRRKYKCDPNKQYNVTNLNYPSFAVVFGPTNVKHMRTLTNVGPAGTYKVSVKLDIPDVKISVEPEVLSFKETNEKKSYIEQTKLANMEMFKKPLAVTLFVLILVFCDVSLARMVKTTEDQKSGYIVLMSKSQMPTSFHHHGVWYESILKSISNSAEMLYTYNNAIHGFSTRITTKETRLLKSQIGDLKVLPDKQYKLHTTRTPQFLGLDKIQGTLLETTSKAGSDVIVGLLDTGVWPESKSFDDTGFGPIPSSWKGKCETGTNFTTLNCNKKLIGARFYLKSKGSISPRDDDGHGTHTASTAAGSLVQNASLFGYAIGTARGMVPSARVAMYKVCWNESCAVSDILAAIDQAIIDNVNIISISLGGEQSEYYDDPVAIAAFSAMEHGIIVSCFAGNEGPVPGSTTNVAPWMITVGAGTLDRDFPAYISLGNGKNYSGVSLYNGNNPLPNHPLPFIYAGNASKERSSKFNSRLCLPDSLAPEKVKGKIVLCDYEQGSRIEKGNTVKSIGGLGMVLANNVAEGDELLPDSNILPETLVGSKEGNAIKQYLFSNPKSMGTIVFQGTKLGIEPSPVVASFSSRGPNVITPKILKPDLIAPGVNILAAYSRNLDDRRVDFNIISGTSMSCPHVSGLAALVKLVHPNWSPAMIRSALMTTSYTTYMNGQPLLDSANKKPATPFDYGVGHVDPVPALNPGLVYDLTVDDYLSFLCALNYTANDIEVVVRRKYKCDPNKQYNVTNLNYPSFAVVFGPTNVKHMRTLTNVGPAGTYKVSVKLDIPDVKISVEPEVLSFKETNEKKSYIVTFSAARMKPKDHYGFGRLEWSDGKHVIGSPIAISWT. 1282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04336 1281 CDD PA_subtilisin_like 151 283 - -
Seca3g04336 1281 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 569 1277 IPR045051 -
Seca3g04336 1281 FunFam Subtilisin-like protease SBT1.9 557 643 - -
Seca3g04336 1281 SUPERFAMILY Subtilisin-like 642 1139 IPR036852 GO:0004252|GO:0006508
Seca3g04336 1281 Gene3D Peptidase S8/S53 domain 670 1148 IPR036852 GO:0004252|GO:0006508
Seca3g04336 1281 FunFam Subtilisin-like protease SBT1.5 1152 1281 - -
Seca3g04336 1281 Pfam Peptidase inhibitor I9 569 643 IPR010259 -
Seca3g04336 1281 Gene3D - 865 1011 - -
Seca3g04336 1281 Gene3D - 145 291 - -
Seca3g04336 1281 FunFam subtilisin-like protease SBT1.5 865 1010 - -
Seca3g04336 1281 FunFam subtilisin-like protease SBT1.5 145 290 - -
Seca3g04336 1281 Pfam PA domain 194 269 IPR003137 -
Seca3g04336 1281 Pfam PA domain 914 989 IPR003137 -
Seca3g04336 1281 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 552 643 IPR037045 -
Seca3g04336 1281 Pfam Subtilase family 7 407 IPR000209 GO:0006508|GO:0008236
Seca3g04336 1281 Gene3D Peptidase S8/S53 domain 10 428 IPR036852 GO:0004252|GO:0006508
Seca3g04336 1281 ProSitePatterns Serine proteases, subtilase family, serine active site. 345 355 IPR023828 -
Seca3g04336 1281 ProSiteProfiles Serine proteases, subtilase domain profile. 639 1135 - -
Seca3g04336 1281 CDD PA_subtilisin_like 871 1003 - -
Seca3g04336 1281 Pfam Subtilase family 668 1127 IPR000209 GO:0006508|GO:0008236
Seca3g04336 1281 SUPERFAMILY Subtilisin-like 12 419 IPR036852 GO:0004252|GO:0006508
Seca3g04336 1281 CDD Peptidases_S8_3 640 1101 IPR034197 -
Seca3g04336 1281 ProSitePatterns Serine proteases, subtilase family, serine active site. 1065 1075 IPR023828 -
Seca3g04336 1281 ProSiteProfiles Serine proteases, subtilase domain profile. 1 415 - -
Seca3g04336 1281 MobiDBLite consensus disorder prediction 1 21 - -
Seca3g04336 1281 Pfam Fibronectin type-III domain 1182 1278 IPR041469 -
Seca3g04336 1281 Pfam Fibronectin type-III domain 462 523 IPR041469 -
Seca3g04336 1281 Gene3D - 432 536 - -
Seca3g04336 1281 Gene3D - 1152 1280 - -
Seca3g04336 1281 FunFam Subtilisin-like protease SBT1.5 670 877 - -
Seca3g04336 1281 MobiDBLite consensus disorder prediction 1 25 - -
Seca3g04336 1281 PRINTS Subtilisin serine protease family (S8) signature 668 687 IPR015500 -
Seca3g04336 1281 PRINTS Subtilisin serine protease family (S8) signature 1064 1080 IPR015500 -
Seca3g04336 1281 PRINTS Subtilisin serine protease family (S8) signature 735 748 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04336 Seca-Chr3 84386745 84396945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04336 1 523 Subtilisin-like Serine Gene Family AT5G67360 64.218 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04336 - - gmx:100801866 978.393