Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04278 ATGACCAAAACTGTAGTGGACGACTGTCGTGGCGTCCTTCATGTCTATAGCGATGGTTCAATAGTTCGCGCTTCGCGTCCAGGCTTCAACGTCCCAGTCCACGACGACGGCACCGTTTTATGGAAAGACGTCGTTTTTGACCCTGTACATGATCTTCAGCTTCGGCTCTATAAGCCAGCCGATTCAACCGGCTCCAAGCTTCCCGTTTTTTATTACATCCACGGCGGCGGTTTCTGCATCGGCTCACGCACCTGGCCAAACTGTCAAAACTATTGCTTCCGCCTCGCTTCTGAGCTTCGAGCCGTAGTTGTCGCTCCCGATTATAGGCTTGCGCCGGAGAACCGCCTCCCAAGTGCAATTGACGACGGCTTTGCTGCTGTTAAGTGGCTTCAAGCCCAAGCCGTGAGCACCGAACCGGACCCCTGGTTGAGCCACGTAGCTGATTTTAGCCAGGTTTTTATTTCAGGTGACTCGGCTGGTGGAAACATAGCTCACAATTTGGCGGTTCGGCTTGGGTTTAGGTCGCTTGATTTGGCGCCGGTTCAGGTCAGGGGTTACGTTCTGTTGGCACCGTTTTTTGGTGGAACCGTTCGAACCAAGTCAGAAGCGGAAGGACCAAAAGACGCTTTTCTCAATTTAGAACTTATTGACAGGGTATTGGAGGCTTTCGATACCAGTTGGGGAAAATACTGA 693 0.5195 MTKTVVDDCRGVLHVYSDGSIVRASRPGFNVPVHDDGTVLWKDVVFDPVHDLQLRLYKPADSTGSKLPVFYYIHGGGFCIGSRTWPNCQNYCFRLASELRAVVVAPDYRLAPENRLPSAIDDGFAAVKWLQAQAVSTEPDPWLSHVADFSQVFISGDSAGGNIAHNLAVRLGFRSLDLAPVQVRGYVLLAPFFGGTVRTKSEAEGPKDAFLNLELIDRVLEAFDTSWGKY. 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04278 230 SUPERFAMILY alpha/beta-Hydrolases 6 223 IPR029058 -
Seca3g04278 230 Pfam alpha/beta hydrolase fold 71 218 IPR013094 GO:0016787
Seca3g04278 230 PANTHER ARYLACETAMIDE DEACETYLASE 9 204 - -
Seca3g04278 230 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 152 164 IPR033140 -
Seca3g04278 230 Gene3D alpha/beta hydrolase 13 228 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04278 Seca-Chr3 83294522 83296374 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04278 5 202 Carbohydrate Esterase AT1G68620 40.099 1.35e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04278 - - gmx:100801391 384.415