Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04257 ATGAACAAGTTTAGGCGTGCTTTGTTTGAGGGGGAAGTATATAAGCTTACTCAGTTTGGCCTCGTGCGTAACTGTGGAAAGTTTCGAGCCGCATCTCATGAATTTAAGATTATGTTTAATGCAACCACAAGGCTCATTCCCTGTCAGAATCCAAGAATTCGTTCTTTGGGCCTTGCTCTTCTGAAGACCTCTGACATAGCTCAGACAAATGGCCGCTCTGATTTCTTGCTGGATTTTATGGGCATACTGACAGCCGTGTCGAAGGAATTGCACCGGGAGAAGGAGGGACGACAGACAAGACTAATGTTGTTAGATTTAGCTGACGAGATGGGAAAGGTTCGTTGTGCTATATTTGGAGACATGGTTGATGTGGTGTGCGGCTTGATGTCTGCATCTGATCCTGGTCTACCTGTTGTTGTGATTCAGCTAGCTAAGGTCAACTTCTATAAGGGTGAGATAGTGAATGAATGA 471 0.448 MNKFRRALFEGEVYKLTQFGLVRNCGKFRAASHEFKIMFNATTRLIPCQNPRIRSLGLALLKTSDIAQTNGRSDFLLDFMGILTAVSKELHREKEGRQTRLMLLDLADEMGKVRCAIFGDMVDVVCGLMSASDPGLPVVVIQLAKVNFYKGEIVNE. 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04257 156 Gene3D - 59 156 IPR012340 -
Seca3g04257 156 SUPERFAMILY Nucleic acid-binding proteins 60 151 IPR012340 -
Seca3g04257 156 Pfam Domain of unknown function DUF223 3 50 IPR003871 -
Seca3g04257 156 Gene3D - 1 50 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04257 Seca-Chr3 82812617 82813278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04257 11 154 Core DNA Replication Machinery Family AT2G06510 26.667 4.12e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04257 - K01810 lja:Lj6g3v0884310.1 147.517