Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04224 ATGGACCGTACTGACAAGCAGCAGCAACAATTGTCCTTGGCCAAGAGTGTCAGGCATAGATGCAGACATGTAGTGAATGGTTCTGCTTTGGCACAGCCACCATTGTCACCTTATATTTCTATTTATGCGCTTGGGAAGCTAATGAATGTCACAGAAGATGATTGCAAGGTCTTTCTTTTCTTAAATGACTTTAAAATTGCAAGGATATTTGTGAGCCTTGCTGTTGTTGTGCACGAGACATTAAATCCACTCTATCAAGCAGAGGCACCTCCATTTCCTCCCACACTGCCTAGACCAATCCCCTGTTCTGCGGTGAGTCTGAATATCTTCATCAGGAAAAGTCAGTCCAACTATGAGAGCTTCAATGATGAAGAATTTGTTATTGAGGACATCTCTGAGGCTAGTGAGGATGATGAGAGACCAGATAGTATTGATGACAAAATTTCTCTGCTTAATCCAGGTAAAATGTTCTGGAACCTGTTTCATTTGCAACCAATGCGTGATCAGAAGGGAGAGGTCCAGTATTTTATTGGTGTTCAACTTTTGATGGTAGTCAACATGTGGAGCCTCTTCACAACCGAATTGAAGATGATATTGCAAAGGAGGGAGAACAATTGGTTTGGTTTCTATTCAAGTGCCTCATTAGTTTAA 651 0.4147 MDRTDKQQQQLSLAKSVRHRCRHVVNGSALAQPPLSPYISIYALGKLMNVTEDDCKVFLFLNDFKIARIFVSLAVVVHETLNPLYQAEAPPFPPTLPRPIPCSAVSLNIFIRKSQSNYESFNDEEFVIEDISEASEDDERPDSIDDKISLLNPGKMFWNLFHLQPMRDQKGEVQYFIGVQLLMVVNMWSLFTTELKMILQRRENNWFGFYSSASLV. 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04224 216 Gene3D PAS domain 114 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04224 Seca-Chr3 81864594 81868218 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04224 148 181 AGC Kinase Gene Family AT3G45780 79.412 9.45e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04224 K20715 - twl:119992162 64.3142