Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04184 TACAAAAGAAGAGACATAAGCAAATTTAACTCCCAGTATAATGCTGCAGGCGTGGAAGAATCTTTAAAAAGTGTAAATCTTTTTCATAGAGGAGTTGCTGATAAACAAGCTGGAAAATATAGTGGAGGAACGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATTGGAGATCCTAAAGTTGTTTATATGGATGAGCCGAGTACTGGATTAGACCCTGCATCAAGAAACAACTTATGGAATGTTGTTAAGCGTGCAAAACAGGATCGTGCAATCATTCTCACCGCACATTCCATGGAAGAGGCAGAAGTCCTATGTGATCGATTAGGAATATTTGTAGATGGTAGCTTACAGTGCATAGGAAATCCAAAGGAGGTAATATTACATTGCTTAAATGATATGCTTTATATATCAAAATCATTTGCAAACTGA 429 0.3706 YKRRDISKFNSQYNAAGVEESLKSVNLFHRGVADKQAGKYSGGTKRRLSVAISLIGDPKVVYMDEPSTGLDPASRNNLWNVVKRAKQDRAIILTAHSMEEAEVLCDRLGIFVDGSLQCIGNPKEVILHCLNDMLYISKSFAN. 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04184 142 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 12 125 IPR026082 GO:0016020|GO:0055085|GO:0140359
Seca3g04184 142 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 120 IPR027417 -
Seca3g04184 142 Pfam AAA domain, putative AbiEii toxin, Type IV TA system 38 98 IPR003959 GO:0005524|GO:0016887
Seca3g04184 142 Gene3D - 2 134 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04184 Seca-Chr3 79984401 79985030 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04184 34 126 Calmodulin-binding Proteins AT2G36910 25.773 3.16e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04184 - - gmx:100814329 205.297