Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04168 ATGCAGGCTCTCCAGAATAACCCAGATGGAAAATCAAAACAATATAAAGACCCAACGTTAGCTCAGTTGTTTCTTATGAATAATATCCATTACAAAGTGAAATCAGTGAGAAGGGTTAGAGGCAAAGGACAAATACATAGAAGAATTGTCCACCAGCATGCAAATCAGTATAAAAGGATCTCTTGCGCAAAGGTTAAATTCTTTAAATACAATTACTTGTGCCAAAGAATCTGTGACTTAGTTCTAATTTTTTAG 255 0.3451 MQALQNNPDGKSKQYKDPTLAQLFLMNNIHYKVKSVRRVRGKGQIHRRIVHQHANQYKRISCAKVKFFKYNYLCQRICDLVLIF. 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04168 84 Gene3D Exocyst complex component Exo70 1 70 - -
Seca3g04168 84 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 65 IPR004140 GO:0000145|GO:0006887
Seca3g04168 84 Pfam Exo70 exocyst complex subunit 1 65 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca3g04168 84 SUPERFAMILY Cullin repeat-like 1 65 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04168 Seca-Chr3 79741966 79742917 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04168 1 65 EXO70 exocyst subunit family AT5G52340 68.056 9.74e-26 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04168 K07195 - pop:7469953 100.523