Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04151 ATGGAGATCCCAAGTCATGCATTTGCAGCTGCACACCCAAAAGATAGAATGCAAAGAAACAGAACTACACTCCAAGACATTATGTCAATGAAATGGGAATCGGAAACACAGAAGAAAGTTCATGAAGGTGATACTGGTTACTTCTGCAAAACATGTAAAAAGCCTCCCAAGTACCCAACTAGAAGGTACATGATACAATTAAAGGTCTCAGATAACACAACATCAGCAAAGTTGACAATGTTTGACCAAGATGCTCTTAACCTACTGAACACAACAACAACTGAACTTTATTCCAAACAAAATGAGGATGATGGTCAACTACCTTAA 327 0.3823 MEIPSHAFAAAHPKDRMQRNRTTLQDIMSMKWESETQKKVHEGDTGYFCKTCKKPPKYPTRRYMIQLKVSDNTTSAKLTMFDQDALNLLNTTTTELYSKQNEDDGQLP. 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04151 108 Pfam Replication factor-A C terminal domain 36 105 IPR013955 -
Seca3g04151 108 MobiDBLite consensus disorder prediction 1 20 - -
Seca3g04151 108 Gene3D - 21 108 IPR012340 -
Seca3g04151 108 SUPERFAMILY Nucleic acid-binding proteins 20 106 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04151 Seca-Chr3 79541067 79541635 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04151 38 103 Core DNA Replication Machinery Family AT5G08020 34.328 7.67e-08 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04151 - K20456 cam:105851697 44.2838