Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04103 ATGGAATTTGATTCCCTTGAGGATGTTAAAGAGTTATACACATTATTTGCTAAGAAAACGGGTTTTGGTATTCGTACTCGTTCAACTAAAGAGAATTTTTGTATACTTGTATGTTCTAATGAAGGCAAGCATATAGTCAAGAATGGTGGGGAAGAGGAATGTACTGTTTGCATGGGAAAAACAAAGAAAAAGTGCTCAACGTCAAGAACAGATTGTAAGGCATCACTTGTTGTTTCAAAAGCATGGAAGAGAAGCAAATGGATTATCAAAAGCTTTGATAATGCTCATAATCATGCCATGATCAGCCCTAAGAGTGTGAGTTATCTTCGATGTCATAAGAAAATGAGCAAAGCGGCTAAAAACCTTGTTGAGAAGTTTGATGAAGAAGGGGTGCCTACAGGAAAGGTTGCCGCTATGTTTAATGGTGGAGATATATCTTTCTCTGATAGGGATTGCTGGAATCATCTTAGAAATGTTAGAAGAAGAAATCTTGATATTGGAGATGCCCAAGCTATTTTGAACTTTTGTAAAGAAAAGCAAGCTGAAAATCCATATTTCTTCTATGCAATACAATGTGATGATGAAGATAGAATGATAAATTTTTTTTGGGTAGACGCAAGATCAAGAATGGCGTATAAGAATTTTGGAGATGTCATTACATTTGATACAACATATAGGACCAACAAGTACAACATGCCTTTTGCTCCTTTTACTGGGTTGAATCATCATTGCCAATCCATATTATTTGGTTGTGCTTTATTACAAGATGAGACTGAGAAGACTTTCGAATGGCTATTTCACACTTGGCTCGAGGCAATGGGTGGAAAAAGTCCCGTGTCAATAATAACAGATCAAGATTTGGCAATGAAAGCTGCTATAGCCAAGGTACTTCCATATACTCGTCATAGATTATGCTTGTGGCACATTAGGAAAAAATTTCCTGAGAAGCTTTCACATATATACCATAAAAAATCATCTTTCAAGCGTGAATTGAAATCATGCATTCGTGATTCACCATCTATAAAGGATTTTGAAGAAGACTGGGAGCGTATAAAGATTGCTTATGATTTGAAGAAGAATGAATGGCTTCAAGGCTTATACAATATAAGAGATTCATGGGTGCCTGTTTATAATAGAGGAACTTTTTTTGGTGGGATGAACACTACACAGAGGAGTGAGAGTATAAATGCTTTTTTTTATGCCTTTGTTAATTCTTCAACAACACTACGAGATTTTGTAGTGAAGTTTGACAAGGCAATGGATAGTCGCTATGAAAAAGAAAGAAGAGAAGATTTTGAGTCCAGGCATCGATCACGTCTCTTAGATATTAAATCAAAGATTGGGGAGCATGCTGCATCAATTTATACAAGAGCCATTTTTGGGAAGTTTCATGATGAACTGGCCAAGATTAATCAATTCACAAAGGAGAAGATTGAAAAGAATGTGTCTCAGTATACATACAGGACATATCTTGGTTATTTTTCAAGCAAAAATATCATTGAAATTCCAAGTAATTATATTTTAGAGCGTTGGACAAAAGACGCTAATAGGGTCATTGGATTTAATGAAAATGGAGCAACTTCTTCATGTGATGCTAATAATTCAGTAACTCTGCGAAGTATACATGTGCATAGTCAACCTAGTTTATTATCTGATCTTGCTGCAAAATCTGAGAATTTATACATGTTCATATCATCTGAAATGGAGCAAACATACAAAAGAGCTATAGCAATGGAATCTGAAATGTGCCTTGAAAATGAGGTTTTTCCCCAAGAGGCCAGTTGTCAAAATCTGTTATGTGAACAGGTAAGTGTTTCTCCTGAATCAAATATTAGAGATCCACTCATGTCACAAACTAAAGGAAGAAAAAAAGATGCATTGAAAATGACTCAACAGGGAAGGATCAAAAGCAGTCTAGAGTTGTCAATAAATCGATCTCTAGTAAAAAGAAGATCATGTCAAGTATGTGGACAACATGGTCACAATCGACGAAGTTGTAAGCAAAAGATAAATGATGAATCTATTGATCAACCTACTTGA 2040 0.3544 MEFDSLEDVKELYTLFAKKTGFGIRTRSTKENFCILVCSNEGKHIVKNGGEEECTVCMGKTKKKCSTSRTDCKASLVVSKAWKRSKWIIKSFDNAHNHAMISPKSVSYLRCHKKMSKAAKNLVEKFDEEGVPTGKVAAMFNGGDISFSDRDCWNHLRNVRRRNLDIGDAQAILNFCKEKQAENPYFFYAIQCDDEDRMINFFWVDARSRMAYKNFGDVITFDTTYRTNKYNMPFAPFTGLNHHCQSILFGCALLQDETEKTFEWLFHTWLEAMGGKSPVSIITDQDLAMKAAIAKVLPYTRHRLCLWHIRKKFPEKLSHIYHKKSSFKRELKSCIRDSPSIKDFEEDWERIKIAYDLKKNEWLQGLYNIRDSWVPVYNRGTFFGGMNTTQRSESINAFFYAFVNSSTTLRDFVVKFDKAMDSRYEKERREDFESRHRSRLLDIKSKIGEHAASIYTRAIFGKFHDELAKINQFTKEKIEKNVSQYTYRTYLGYFSSKNIIEIPSNYILERWTKDANRVIGFNENGATSSCDANNSVTLRSIHVHSQPSLLSDLAAKSENLYMFISSEMEQTYKRAIAMESEMCLENEVFPQEASCQNLLCEQVSVSPESNIRDPLMSQTKGRKKDALKMTQQGRIKSSLELSINRSLVKRRSCQVCGQHGHNRRSCKQKINDESIDQPT. 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04103 679 Pfam MULE transposase domain 218 312 IPR018289 -
Seca3g04103 679 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 573 IPR031052 GO:0006355
Seca3g04103 679 Pfam FAR1 DNA-binding domain 12 100 IPR004330 -
Seca3g04103 679 MobiDBLite consensus disorder prediction 611 631 - -
Seca3g04103 679 ProSiteProfiles Zinc finger CCHC-type profile. 653 668 IPR001878 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04103 Seca-Chr3 78547947 78550096 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g04103 MULE 4.8e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04103 - - qlo:115970754 805.438