Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04100 ATGTCTGCTACCTGCAGTTTCTTGTTCTTCTCCTTCACCCTTGTGTTCTCTTTGTTTTCTTTTCTCATCTTCATCTCGAGGATGAAGCCATGGTGTAACTGCGACACTTGCAAGAGCTACTTGAACATGAGTTGGGTTAACAAGTTTTGCAATCTCTGCGACTGGTACACTCATCTCCTACGCAACTCCCCGACCGGAACCATTCATGTCCACGTGTTGGGAAACACCATCACAACTAACCCAGACAACGTGGAATACATCCTCAAAACTAACTTCCACAACTACCCAAAAGGGAAACCTTTCTCCACTCTCCTCGGCGATCTTCTCGGCCGAGGAATCTTCAATGTCGACGGCGAATCTTGGAAGTTTCAGCGCAAGATGGCAAGCATGGAGCTCGGAAGCGTCGCGATTCGATCCTACGCGATGGAACTAGTCACCGAGGAGATCCAAACGAGGCTAATTCCTCTCTTAGCCTCAACCACACGGAGTGAAAACGGAGTTTTGGACCTTCAAGACATCCTAAGACGTTTCTCATTCGACAACATTTGCAAATTCTCCTTCGGTCTTGACCCAGGCTGTCTCCTTCCATCGCTCCCAGTTTCAAATCTCGCCGTCGCATTTGACCTGGCATCGAAGCTCTCTGCAGAGCGAGCCTTGACCGCGTCAACGTTGATATGGAAGACAAAACGTTTCTTCAATATAGGATCAGAGAAGAAGCTGAAAGAAGCAATAAAGGTTGTAAACGATTTAGCTCAAGAGATGATACAGCAGAGAAAAGAAATGGATATCGGCACAAGAAAAGACCTTCTCTCTCGTTTCATGGCTTCAGTAAACGACGACGTATACTTGCGGGACATCGTTGTCAGTTTCCTTTTGGCAGGCCGTGACACTGTAGCTGCCGGGTTGACCGGGTTCTTCGCTTTGCTGTCTAAAAGCCCAGAGGTGGAGGCGAAGATCCGGGAAGAGCTGGGCCAGGTGGTGGGCCCGGGCCAGGAGTTTGCGAGCTTTGATCAGACGCGGGAAATGCATTACCTAACCGCAGCGATTCACGAGAGCATGAGGCTCTTTCCACCGGTTCAGTTTGATTCCAAGTATGCTACGGAGGATGACGTGTTGCCAGATGGCACATTAGTGAACAAAGGGAGTAGGGTCACGTACCACCCGTATGCGATGGGTCGGATGGAGAAAATTTGGGGGCCTGATTGTCTTGAATTCAAGCCCGAGAGGTGGTTGAAAGATGGCGTGTTTGTACCAAAATGCCCTTTCAAGTACCCGGTTTTTCAGGCTGGTGTCAGGGTTTGTTTGGGAAAGGACTTAGCTTTGGTGGAGATGAAGTCTGTGGTTGCAGCCTTGCTACCGCGGTTCGATATTCGGGTGGTTGAACCGGATCAGGAGCTCCGGTTCGCACCCGGTCTAACTGCCACATTCAGAGGTGGCTTACCCGTTCATGTTTATGAAAGAAGATCCTAA 1470 0.4952 MSATCSFLFFSFTLVFSLFSFLIFISRMKPWCNCDTCKSYLNMSWVNKFCNLCDWYTHLLRNSPTGTIHVHVLGNTITTNPDNVEYILKTNFHNYPKGKPFSTLLGDLLGRGIFNVDGESWKFQRKMASMELGSVAIRSYAMELVTEEIQTRLIPLLASTTRSENGVLDLQDILRRFSFDNICKFSFGLDPGCLLPSLPVSNLAVAFDLASKLSAERALTASTLIWKTKRFFNIGSEKKLKEAIKVVNDLAQEMIQQRKEMDIGTRKDLLSRFMASVNDDVYLRDIVVSFLLAGRDTVAAGLTGFFALLSKSPEVEAKIREELGQVVGPGQEFASFDQTREMHYLTAAIHESMRLFPPVQFDSKYATEDDVLPDGTLVNKGSRVTYHPYAMGRMEKIWGPDCLEFKPERWLKDGVFVPKCPFKYPVFQAGVRVCLGKDLALVEMKSVVAALLPRFDIRVVEPDQELRFAPGLTATFRGGLPVHVYERRS. 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04100 489 CDD CYP86A 70 480 - -
Seca3g04100 489 Pfam Cytochrome P450 76 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g04100 489 PANTHER CYTOCHROME P450 23 481 - -
Seca3g04100 489 Coils Coil 240 260 - -
Seca3g04100 489 Gene3D Cytochrome P450 42 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g04100 489 PRINTS P450 superfamily signature 293 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g04100 489 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g04100 489 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g04100 489 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g04100 489 PRINTS E-class P450 group I signature 282 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g04100 489 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g04100 489 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g04100 489 PRINTS E-class P450 group I signature 302 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g04100 489 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g04100 489 SUPERFAMILY Cytochrome P450 50 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04100 Seca-Chr3 78472935 78474404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04100 22 487 Cytochrome P450 AT2G27690 63.002 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04100 K20624 - gmx:100813091 810.831