Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04067 ATGTTTGAGGAGGTTCATAGGACTCAAGCTGTATGGTTGATACCAGATTCACAACTTAGGGAGGAGCTTCAGATATCTATATCAGAGAAGCTGATCCTAGCATATAGGTCATTCCTTGGGAGGTTCAAGAGCCACATAGAGAGTGGAAGGCATCCAAAGAACTACATTAAGTATTCTGTTGAGGACCTAGAGGATGCTGTTTTGGATTTTTTTTAA 216 0.4074 MFEEVHRTQAVWLIPDSQLREELQISISEKLILAYRSFLGRFKSHIESGRHPKNYIKYSVEDLEDAVLDFF. 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04067 71 Gene3D Exocyst complex component Exo70 1 71 - -
Seca3g04067 71 Pfam Exo70 exocyst complex subunit 2 67 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca3g04067 71 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 71 IPR004140 GO:0000145|GO:0006887
Seca3g04067 71 SUPERFAMILY Cullin repeat-like 1 71 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04067 Seca-Chr3 77302228 77302443 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04067 1 71 EXO70 exocyst subunit family AT3G14090 77.465 4.38e-35 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04067 K07195 - gmx:100808671 135.576