Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04034 ATGACTGCTCATCACAGAAATTCAGTCTCTCTAATTGGGTACTGCAATGAAGGTGAAATTAAAGCACTGATTTATGAAATCATGGCCAATGGAAATCTCCAACAACATTTATCAGATTTAGCTTTGCAAATGTTACAAAAACAGTCAACACTAGCATTGGTCTGA 165 0.3576 MTAHHRNSVSLIGYCNEGEIKALIYEIMANGNLQQHLSDLALQMLQKQSTLALV. 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04034 54 SUPERFAMILY Protein kinase-like (PK-like) 3 41 IPR011009 -
Seca3g04034 54 Gene3D Transferase(Phosphotransferase) domain 1 1 53 - -
Seca3g04034 54 PANTHER OS07G0107800 PROTEIN-RELATED 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04034 Seca-Chr3 75918705 75919586 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04034 4 39 Receptor kinase-like Gene Family AT1G51790 61.111 2.51e-13 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Seca3g04034 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04034 - - qsu:111986959 71.6329