Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04018 ATGCTTTTATGTGCAAGTGCAATATTGCAGATAAGGAGGTCATCGTATCATGATGTTGTGAGGGTAGCGGAGATTCAGAAGGTATTGGATATCAGTGGGGTTCAGACATATGTGATTAACAGCGCCAGAGTTCTTTTCCTGAATGCGAGGCCTCAGAGTCAGATTAAGACTAATAGTAATGCTGTTAGTGCTGCTAAAATCAACTCCTATTTCTGTGAGATATGCAGAAGAAATCTCTTGGACCCTTTTCGCTTCTGTTCTTTGGGATGCAAGCTTGTGGGAATAAAGAAGAATGGGAATGCGAGCTTTGTCTTAAGCGCAAAGAAAGACGAAGAAATAGGGGAAGGAATGGCAAGAAGGTTGTTATCAAAGGAAGAAGACGAAGAATTGCGTGAAGGAATCCACAAACAAGTATACAAAAGCACGCCTTCTCCTTGTCCTCCTCGGCCATCACCACAAGCTTGCTCAAATTCAAGGAGAAGAAAAGGAATACCTCATAGGGCACCTTTAGGACCCTAA 519 0.4277 MLLCASAILQIRRSSYHDVVRVAEIQKVLDISGVQTYVINSARVLFLNARPQSQIKTNSNAVSAAKINSYFCEICRRNLLDPFRFCSLGCKLVGIKKNGNASFVLSAKKDEEIGEGMARRLLSKEEDEELREGIHKQVYKSTPSPCPPRPSPQACSNSRRRKGIPHRAPLGP. 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04018 172 Pfam PLATZ transcription factor 12 92 IPR006734 -
Seca3g04018 172 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 8 170 - -
Seca3g04018 172 MobiDBLite consensus disorder prediction 124 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04018 Seca-Chr3 75475807 75477853 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Seca3g04018 PLATZ 6.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04018 - - gmx:100787414 239.965