Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04009 ATGGCGAACGGTACGGATTCGGAGCAGTTTGTGGTGCTTTCTACGGTGCGAACGGGTCTGAAGAGGGAGTTCGCCTTTGCCATGAAGGCCCAGTCTGAGATCTGTGCCTCCCTCGGTCGAACCCGGTCCAACAAGAACCGGAATGAGGTTCACGCTCCGGCTAGCAAAAGGTCCAGGAAGTCCGGTTCAGTGAAGAAAAATAAGAATGAGGAAACGAAGGAGGAGGACGTGTGTGATGCTCTGAGCGAGGAGGAGGAGGCAAAAAGTGACGTGGTGGACCTTGAAGAACCCAAGAATCAGGTGGGAGAAGAAACTGTGAGCGAGAATGAACCCAAAACTGAGAATGAGCATGTATTGAATTGTTCAAAGGAAGAGGTGATGGATGAAATGGAGCAACCCGTTTGCGAAAATGGGGTCAAAGAGGGAGAGACATGTGCTAAGGAAGAAGGTACTATTCCAATTTTGTGTGGGGATGATTGCAAGGTGAAGGTGGTTTCTACAGAGAAGGCGCCAAGGAGGTTTACGAGGTCAACGCTGAGGAAAAAATTGGATGATGAAGGGAATGCTAGTGCCGTAGATTTTGACATTGGTGATGATGGTAAGAAGGAAAATGAGGCTGGCACGGTAATCACCACTACCCCAATTCAAGTAAAAAAGTCCAAGACTGGTTCTAATTGGAAGAAGTTCCCTTCGAAGCTGAAGGACCTTCTATCCTCTCGGATTCTTGAGGGAGTACCCGTGAGTTATATCCGCAGTCTGAAGGCGCGAAAGCCTGGGGAAGCAGGGCTCCGGGGAGAGATTAGAGGCGATGGGATTGTGTGCTATTGTGAAAGTTGTAATGGGGTTGAGGTTGTGACACCCACTGTGTTTGAGCTGCATGCTGATAGTTCAAACAAACGCCCCCCAGAGTATATTTACCTTGAGAATGGAATTACCCTCCGTGATATCATGAATACATGTTTGAACATTCCATTAGACTCTTTGGAGGAAGCTGTCCAAAAGGTCCTTGGAGGCTTTACTATGAAGAAATCTAGCTTCTGTGTGAACTGCAGAGGTTTGAAATTTGCACTTTAA 1074 0.4758 MANGTDSEQFVVLSTVRTGLKREFAFAMKAQSEICASLGRTRSNKNRNEVHAPASKRSRKSGSVKKNKNEETKEEDVCDALSEEEEAKSDVVDLEEPKNQVGEETVSENEPKTENEHVLNCSKEEVMDEMEQPVCENGVKEGETCAKEEGTIPILCGDDCKVKVVSTEKAPRRFTRSTLRKKLDDEGNASAVDFDIGDDGKKENEAGTVITTTPIQVKKSKTGSNWKKFPSKLKDLLSSRILEGVPVSYIRSLKARKPGEAGLRGEIRGDGIVCYCESCNGVEVVTPTVFELHADSSNKRPPEYIYLENGITLRDIMNTCLNIPLDSLEEAVQKVLGGFTMKKSSFCVNCRGLKFAL. 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04009 357 MobiDBLite consensus disorder prediction 84 116 - -
Seca3g04009 357 PANTHER AUTOIMMUNE REGULATOR 51 352 - -
Seca3g04009 357 MobiDBLite consensus disorder prediction 36 116 - -
Seca3g04009 357 Pfam Tify domain binding domain 265 320 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04009 Seca-Chr3 75382191 75383812 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04009 195 352 PHD Transcription Factor Family AT2G36720 29.747 4.32e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04009 - - aprc:113859749 365.54