Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03995 ATGGCGGGGAAGGTGTCGAAGGCAGCTTACGATGCAAAGATGTGGAAGCTTCTGCGAGAGTACAGCCAGGTACTGGTGATTTCATCGGATAATGTGGGCTCCAACCAGCTTCAGGGGATACGAAGGGCACTCCATGATGACTCGGTGGTAGTGATGGGGAAGAACTCATTGATGAAGCGCTCTATCATTCAGGATGCTCACAAAACTGGGAATAAAGCCTTCCTTAACCTAGTTCCCCTCCTTGTGGGGAACGTGGCGTTGATTTTCACCAAAGGGGACTTGAGGGAGGTTAGCGAACGGATTGCCAAGTACAAGCAGAGAAGCCATGTTCTCTTTTGTGTTGCTAAGTTTTCAGACTATGAGTATGATTCTCCACAACTAAGAGTGCTTGACATCTCAAGGCTAATTAACACACTAGTGTTAATTAGAAACTTTTTACTAGTGTTCATAGCTGTGGTGCAGGTTGTAAATCCTATTCTCATGTGCCCCAAGTACATGTCATATGACTCATACCGCACTTGTTCCTATATGCAATCTGGCCAGTTACCTTTGGGCCTAACATGTTGTAACCAGCAATCTTCGCAGGCTTCTGAGCCTTTTCTTGTATGCTCAAAATTCTCTCCACAACAGCACTGTTTCTTGATGAGATCGAGACAATTCTTGATGACGAGCATATGGGCTCCTTTTCTTCTTTTGGCTGGCAACTTGTGA 711 0.4543 MAGKVSKAAYDAKMWKLLREYSQVLVISSDNVGSNQLQGIRRALHDDSVVVMGKNSLMKRSIIQDAHKTGNKAFLNLVPLLVGNVALIFTKGDLREVSERIAKYKQRSHVLFCVAKFSDYEYDSPQLRVLDISRLINTLVLIRNFLLVFIAVVQVVNPILMCPKYMSYDSYRTCSYMQSGQLPLGLTCCNQQSSQASEPFLVCSKFSPQQHCFLMRSRQFLMTSIWAPFLLLAGNL. 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03995 236 Gene3D - 4 117 IPR043141 -
Seca3g03995 236 Pfam Ribosomal protein L10 6 104 IPR001790 -
Seca3g03995 236 SUPERFAMILY Ribosomal protein L10-like 7 119 IPR043141 -
Seca3g03995 236 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 5 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03995 Seca-Chr3 75231930 75233343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03995 1 105 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 64.220 1.92e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03995 K02941 - mnt:21409050 149.058