Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03992 ATGACTAAGGACGAAGATTATCATTCGAAGTTTAGATCAGAATGTGGCCATGCGACGTTGATTTCTTCCTGTGCAGAGAAATGGGTGAAAGAACAAGCTTCGATGAAGATTGACCTTGAAATTGCGGGGATCTTAAAGGAGCATTATTGGATACGCTTTGGAGTTGTTGTAACAGAGGAGGCGGGCCACATTGTTGCTTTCTTGGCATCACCCTTGGCATTGGCTACCACAGAAGTAGACCGTGAAATAATGCAAGTTGCAGCTAAGAGTAATTTGAAACCAGTTTCACTTGAATTAGGAGGGAAATCACCCTTCATAGTGTTTGATGATGCTGATGTGGATAAAGCTGCTGAACTTGCTCTCTTGGAAATGAGAGTAGTAATTATGAATTATGATCCTATATTCTTCTGTTGGCTAAGAGTTTCTTATTGTAGGTTGACAAGAGGCAATTTGAAAAATTTCTTTCCTATATTGAGCATGGAAAGAGAGAAGGGCCACCCTTTTACAGGTGGTAAAAGAGTGGGCAACAAAGGTTACTACATTGAGCCTACTATTTTCTCCAATGTTAAGGAGGACATGCTTATAGCAAAGGATGAAATATTTGGCCCTGTGATGGCGTTGATGAAGTTTAAGTAA 636 0.4025 MTKDEDYHSKFRSECGHATLISSCAEKWVKEQASMKIDLEIAGILKEHYWIRFGVVVTEEAGHIVAFLASPLALATTEVDREIMQVAAKSNLKPVSLELGGKSPFIVFDDADVDKAAELALLEMRVVIMNYDPIFFCWLRVSYCRLTRGNLKNFFPILSMEREKGHPFTGGKRVGNKGYYIEPTIFSNVKEDMLIAKDEIFGPVMALMKFK. 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03992 211 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 162 211 - -
Seca3g03992 211 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 55 131 IPR016162 GO:0016491
Seca3g03992 211 Pfam Aldehyde dehydrogenase family 77 120 IPR015590 GO:0016491
Seca3g03992 211 Pfam Aldehyde dehydrogenase family 163 211 IPR015590 GO:0016491
Seca3g03992 211 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 97 104 IPR029510 GO:0016491
Seca3g03992 211 SUPERFAMILY ALDH-like 77 211 IPR016161 GO:0016491
Seca3g03992 211 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 160 211 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03992 Seca-Chr3 75210494 75212966 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03992 75 211 Aldehyde Dehydrogenase Gene Family AT3G24503 44.910 1.93e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03992 K12355 - gmx:100791396 144.436