Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03962 ATGGCTATATCCCCCTCTGGTGTAAACCCAACTATTGGAGCAAAACTATCTCCTGGTTCTCCAGAAGCAGTTACACTAGCTCACTGGATCTGCAAGAGCTACAGGCAAGTCTACTTATCTATTTCTGTTTACTATTTGGGGATAGATTTACTGAGATCAGATTCTCTTGTTGGTGACACGATGCTAAAACATTTGTGGCATCATCAGGATGCCATTTTATGTTGTTCTTTGAAGTCGCAGTCGGTGTTCATCTTTACAAATCAAGCTGGCCTTGACATGTTGGAAACAACTCTAGTGGCCTTGACATGTTGGAAACAATTCTAG 324 0.4167 MAISPSGVNPTIGAKLSPGSPEAVTLAHWICKSYRQVYLSISVYYLGIDLLRSDSLVGDTMLKHLWHHQDAILCCSLKSQSVFIFTNQAGLDMLETTLVALTCWKQF. 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03962 107 Pfam MEKHLA domain 25 102 IPR013978 -
Seca3g03962 107 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 101 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03962 Seca-Chr3 74615209 74615754 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03962 1 101 Homeobox Transcription Factor Family AT5G60690 66.667 1.68e-37 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03962 K09338 - gmx:100804870 165.236