Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03952 ATGGCAGCTACAGCTACCTTACACCTTCTTTCACGCCTCCGATTCATCGCCAAGCCTCAACCTTTCCTATCACCCCATTCAATCCCTTTCCATTTCTCCCTCACCCCTAAAACAAAGAAACCTCGTCGATTCCGATTGTTCTCAATGGCCGCGGAACCGAAGGAGTCGCCTGCTAACAACCCCGGTCTTCATACAACTCTAGACGAAGCTACCAAGGGATACTTTATGCAACAAACTATGTTTAGAATCAAAGACCCCAAAGTGAGCCTTGATTTTTATTCTCGCGTTTTGGGCATGTCTTTGCTTAAGAGATTGGATTTTCCCGAGATGAAGTTCAGCCTGTACTTTATGGGGTATGAGAACACAGCAGAAGCTCCAAGCAATCCAGTTGATAGAACAGTTTGGGCCTTCTCTCAAAAGGCTACAATTGAGCTGACACATAATTGGGGTACCGAAAGTGATCCAGAGTTCAAAGGGTACCACAATGGCAATTCTGAGCCTCGTGGCTTTGGTATGAGTCAGGAGAGGCACAGCCTCACAGGAAACAGGAGGGGACACATTGGCATAACTGTTGATGACACCTATAAAGCATGTGAAAGATTTCAGAATTTGGGAGTTGAGTTTGTTAAGAAACCAGATGATGGGAAAATGAAAGGGATAGCATTTATTAAGGATCCTGATGGATACTGGATTGAAATCTTCGATAAAAAAACAATAGGAAATGTAACACAAGGTGCTTCTTAA 744 0.4382 MAATATLHLLSRLRFIAKPQPFLSPHSIPFHFSLTPKTKKPRRFRLFSMAAEPKESPANNPGLHTTLDEATKGYFMQQTMFRIKDPKVSLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYENTAEAPSNPVDRTVWAFSQKATIELTHNWGTESDPEFKGYHNGNSEPRGFGMSQERHSLTGNRRGHIGITVDDTYKACERFQNLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDKKTIGNVTQGAS. 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03952 247 Gene3D - 51 243 IPR029068 -
Seca3g03952 247 CDD GlxI_Zn 76 234 - -
Seca3g03952 247 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 75 236 IPR037523 -
Seca3g03952 247 ProSitePatterns Glyoxalase I signature 1. 78 99 IPR018146 GO:0004462|GO:0046872
Seca3g03952 247 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 76 237 IPR029068 -
Seca3g03952 247 PANTHER LACTOYLGLUTATHIONE LYASE GLYOXALASE I 29 241 - -
Seca3g03952 247 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 78 233 IPR004360 -
Seca3g03952 247 NCBIfam lactoylglutathione lyase 76 238 IPR004361 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03952 Seca-Chr3 74445684 74451471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03952 22 247 Calmodulin-binding Proteins AT1G08110 70.130 2.09e-111 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03952 K01759 - gmx:100779383 433.335