Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03947 ATGACAGAAACTAGTGGCATTGTTACTATGGAGAATCCAAGAGTAGGTATTCGTCATACTGGCTCAGCTGGAAAGCTAGTTTCAGGAGTGGAAGCTCAAATAGTGAGTGTGGATACACATATGCTGCTTCCTCCAAGACAATTGGGAGAATTATGGGTACGGGGTCCTAACATGATGCAAGGTTATCATAACAATCCACAGGCTACAAGATTGACTATAGATAAAAAAGGGTGGGTACATACAGGAGATCTTGGATATTTTGATGAGGATGGGCAACTTTATGTTGTTGACCGTATCAAAGAACTGATCAAGTATAAAGGTCTTCAGGTTTCCCCAGCAGAACTTGAAGGGCTTCTCGTTTCTCACCCTGAAATCCTAGATGCTGTCGTCGTCCCGTAA 399 0.4286 MTETSGIVTMENPRVGIRHTGSAGKLVSGVEAQIVSVDTHMLLPPRQLGELWVRGPNMMQGYHNNPQATRLTIDKKGWVHTGDLGYFDEDGQLYVVDRIKELIKYKGLQVSPAELEGLLVSHPEILDAVVVP. 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03947 132 Gene3D - 1 100 IPR042099 -
Seca3g03947 132 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 132 - -
Seca3g03947 132 Gene3D - 101 132 IPR045851 -
Seca3g03947 132 Pfam AMP-binding enzyme 1 105 IPR000873 -
Seca3g03947 132 SUPERFAMILY Acetyl-CoA synthetase-like 1 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03947 Seca-Chr3 74378053 74379872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03947 1 132 Monolignol Biosynthesis Gene Families AT4G05160 77.273 3.45e-70 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03947 K01904 - gmx:100808944 246.899