Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03944 ATGATCGAGATCAGAATAAGAAGCAAAAAGAAGGTTGTAGGTGGAATTTTGAAGCTCGAGATTGTCTTGGAAAAGCTTCAGAAGACTCTTTTACTAGGTAGAAATAAATTAAGTTCTTGTGGTGGCACAACCTCTGTGCCAGGGGATGTGAAAGAAGGACACTTTGCTGTGATTTCAGAGGATGGGGATGAGCTGCCAAAGAGATTTGTGGTGCCATTGAGGAGTTTAAACAACACAACATTCTTGACGCTATTGGAGCAAGCAGCCGAAGAGTTTGGGTTTGATCAAGATGGTGCACTAACCATTCCTTCAAGGCCTATTGAGTTTGAGATGTTATTGGGCCAACTATGGGCCGAGATCAGAGTAAGAAGCAAAAAGAAGGTTGTAGGTGGCATTTTGAAGCTCAAGATTGTCTTGGAAAAGCTTCAGAAGACTCTGTTACTTGGTAGAAATAAATTAAGTTCTTGTTCTGTGCCAGAGGATGTGAAAGAAGGACATTTTGCTGTGATTGCAGTTGCAGAGGATGGGGAGGAACCGAAGAGATTCGTGGTGCCATTGAGCTGTTTAACCAACCCTACATTCTTGAGGCTATTGGAGCAAGCAGCAGAAGAGTATGGGTTTGAACAACATGGTGCATTAACCATTCCTTGCAGGCCTAGTGAGCTTGAGAGGCTATTGGCCCAGCAATGCCAATGGCAGGAAGAGGGATCTGAAACTTCTGGGCTAAGTTAA 732 0.4372 MIEIRIRSKKKVVGGILKLEIVLEKLQKTLLLGRNKLSSCGGTTSVPGDVKEGHFAVISEDGDELPKRFVVPLRSLNNTTFLTLLEQAAEEFGFDQDGALTIPSRPIEFEMLLGQLWAEIRVRSKKKVVGGILKLKIVLEKLQKTLLLGRNKLSSCSVPEDVKEGHFAVIAVAEDGEEPKRFVVPLSCLTNPTFLRLLEQAAEEYGFEQHGALTIPCRPSELERLLAQQCQWQEEGSETSGLS. 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03944 243 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 150 225 IPR003676 GO:0009733
Seca3g03944 243 Pfam Auxin responsive protein 150 227 IPR003676 GO:0009733
Seca3g03944 243 Pfam Auxin responsive protein 33 113 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03944 Seca-Chr3 74266986 74278707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03944 125 241 Calmodulin-binding Proteins AT4G34750 36.134 6.80e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03944 - K14488 sind:105170743 150.214