Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03938 ATGATCCTGTTCTCTATTGGAGCTCAAGCTGCTTGTGGTGCAACTTTTGGAATCATTCCTTTTATCTCAAGGAGGTCTTTGGGGATTATATCAGGTCTAACTGGTGCAGGTGGTAACTTTGGGTCTGGATTGACCCAGTTGATCTTTTTTTCAACCAACAAATTCTCCACATCCACAGGTCTGTCCTTGATGGGTGTCATGATTGTGTGTTGCACTCTTCCTGTGACTCTTGTTCACTTCCCACAGTGGGGTAGCATGTTCCTCCCTCCTTCAAAAGACATCAACAAATCCACTGAAGAATACTATTACACCGCTGAATGGAACGAGGATGAGAAGAAGAAGGGCTTGCACCAGCAGAGTCTCAAGTTTGCAGAGAATAGTCGCTCAGAGAGAGGCAAGCGTGTGGCCTCTGCACCAACACCACCAAATGCAACTCCCACCCATGTCTAA 450 0.4644 MILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLIFFSTNKFSTSTGLSLMGVMIVCCTLPVTLVHFPQWGSMFLPPSKDINKSTEEYYYTAEWNEDEKKKGLHQQSLKFAENSRSERGKRVASAPTPPNATPTHV. 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03938 149 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 135 IPR044772 GO:0015112
Seca3g03938 149 Gene3D MFS general substrate transporter like domains 1 86 IPR036259 -
Seca3g03938 149 MobiDBLite consensus disorder prediction 111 132 - -
Seca3g03938 149 MobiDBLite consensus disorder prediction 111 149 - -
Seca3g03938 149 SUPERFAMILY MFS general substrate transporter 1 79 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03938 Seca-Chr3 74202498 74202947 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03938 1 149 Inorganic Solute Cotransporters AT5G60770 79.195 1.98e-80 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03938 K02575 - gmx:100807710 267.314