Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03937 ATGGCTGAGATTGAGGGATCTCCAGGAAGCTCCATGCATGGAGTAACAGGCAGAGAGCAAACCTTCATAGCCTCAGTTGCTTCCCCAATGGTCCCAACTGATACCACTGCCAAATTTGCTTTGCCTGTAGATTCTGAGCACAAAGCCAAGGTTTTTAAACTGTTCTCCATGGCCAATCCCCACATGAGAACCTTCCACTTATCTTGGATATCCTTCTTCACTTGCTTTGTCTCAACCTTTGCAGCAGCTCCTCTTGTCCCCATCATTCGTGACAACCTCAACCTCACTAAAAGTGACATTGGCAATGCTGGTGTTGCCTCTGTTTCTGGCAGTATTTTCTCTAGGCTTGCAATGGGTGCAGTTTGTGACCTGTTAGGCCCACGTTATGGCTGTGCCTTCCTTATCATGCTCTCTGCCCCAACTGTGTTCTGCATGTCATTTGTGAAAGATGCTGCAGGGTATATAGCTGTTCGGTTCATGATTGGGTTCTCCCTGGCCACATTTGTCTCATGCCAATACTGGATGAGCACAATGTTTAACAGTAAGATAATAGGGCTTGTAAATGGGACAGCAGCTGGGTGGGGTAACATGGGTGGTGGAGCCACTCAGCTCATAATGCCATTGGTCTATGAGTTGATCAGGCGAGCTGGGGCTACTCCCTTTACTGCATGGAGGATTGCCTTCTTCATCCCTGGTTGGTTGCATGTCATCATGGGCATCCTGGTCTTAACCTTAGGCCAAGATTTACCTGATGGCAACCTTGGTGCCTTACAGAAGAAAGGTGATGTTGCTAAAGACAAGTTCTCCAAGGTGTTATGGTATGCCATAACAAATTACAGGACATGGATTTTTGCCCTCCTCTATGGCTACTCTATGGGAGTTGAATTGACCACTGACAATGTCATTGCTGAGTATTTCTATGACAGAGATTTAATCTCAAGCTGCACACTGCTGGAATCATTGCTGCTTCATTTGGAATGGCAAACCTTGTTGCTCGCCCCTTTGGTGGATATGCCTCTGATGTTGCAGCTCGGTTGTTTGGCATGA 1047 0.469 MAEIEGSPGSSMHGVTGREQTFIASVASPMVPTDTTAKFALPVDSEHKAKVFKLFSMANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKSDIGNAGVASVSGSIFSRLAMGAVCDLLGPRYGCAFLIMLSAPTVFCMSFVKDAAGYIAVRFMIGFSLATFVSCQYWMSTMFNSKIIGLVNGTAAGWGNMGGGATQLIMPLVYELIRRAGATPFTAWRIAFFIPGWLHVIMGILVLTLGQDLPDGNLGALQKKGDVAKDKFSKVLWYAITNYRTWIFALLYGYSMGVELTTDNVIAEYFYDRDLISSCTLLESLLLHLEWQTLLLAPLVDMPLMLQLGCLA. 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03937 348 CDD MFS_NRT2_like 65 309 IPR044772 GO:0015112
Seca3g03937 348 Gene3D MFS general substrate transporter like domains 57 253 IPR036259 -
Seca3g03937 348 SUPERFAMILY MFS general substrate transporter 59 308 IPR036259 -
Seca3g03937 348 Pfam Major Facilitator Superfamily 69 294 IPR011701 GO:0022857|GO:0055085
Seca3g03937 348 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 309 IPR044772 GO:0015112
Seca3g03937 348 FunFam High affinity nitrate transporter 57 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03937 Seca-Chr3 74201013 74202399 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03937 1 309 Inorganic Solute Cotransporters AT1G08090 83.819 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03937 K02575 - gmx:547946 610.912