Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03935 ATGGCTGAGATTGAGGGATCTCCAGGAAGCTCCATGCATGGAGTAACAGGCAGAGAGCAAACCTTCATAGCCTCAGTTGCTTCCCCAATGGTCCCAACTGATACCACTGCCAAATTTGCTTTGCCTGTAGATTCTGAGCACAAAGCCAAGGTTTTTAAACTGTTCTCCATGGCCAATCCCCACATGAGAACCTTCCACTTATCTTGGATATCCTTCTTCACTTGCTTTGTCTCAACCTTTGCAGCAGCTCCTCTTGTCCCCATCATTCGTGACAACCTCAACCTCACTAAAAGTGACATTGGCAATGCTGGTGTTGCCTCTGTTTCTGGCAGTATTTTCTCTAGGCTTGCAATGGGTGCAGTTTGTGACCTGTTAGGCCCACGTTATGGCTGTGCCTTCCTTATCATGCTCTCTGCCCCAACTGTGTTCTGCATGTCATTTGTGAAAGATGCTGCAGGGTATATAGCTGTTCGGTTCATGATTGGGTTCTCCCTGGCCACATTTGTCTCATGCCAATACTGGATGAGCACAATGTTTAACAGTAAGATAATAGGGCTTGTAAATGGGACAGCAGCTGGGTGGGGTAACATGGGTGGTGGAGCCACTCAGCTCATAATGCCATTGGTCTATGAGTTGATCAGGCGAGCTGGGGCTACTCCCTTTACTGCATGGAGGATTGCCTTCTTCATCCCTGGTTGGTTGCATGTCATCATGGGCATCCTGGTCTTAACCTTAGGCCAAGATTTACCTGATGGCAACCTTGGTGCCTTACAGAAGAAAGGTGATGTTGCTAAAGACAAGTTCTCCAAGGTGTTATGGTATGCCATAACAAATTACAGGACATGGATTTTTGCCCTCCTCTATGGCTACTCTATGGGAGTTGAATTGACCACTGACAATGTCATTGCTGAGTATTTCTATGACAGATTTAATCTCAAGCTGCACACTGCTGGAATCATTGCTGCTTCATTTGGAATGGCAAACCTTGTTGCTCGCCCCTTTGGTGGATATGCCTCTGATGTTGCAGCTCGGTTGTTTGGCATGAGAGGTAGGCTTTGGACCCTCTGGATCCTCCAAACCTTTGGAGGGGTTTTCTGTATATGGCTTGGCCGTGCCAATTCCCTTCCAATTGCTGTCTTGGCCATGATCCTGTTCTCTATTGGAGCTCAAGCTGCTTGTGGTGCAACTTTTGGAATCATTCCTTTTATCTCAAGGAGGTCTTTGGGGATTATATCAGGTCTAACTGGTGCAGGTGGTAACTTTGGGTCTGGATTGACCCAGTTGATCTTTTTTTCAACCAACAAATTCTCCACATCCACAGGTCTGTCCTTGATGGGTGTCATGATTGTGTGTTGCACTCTTCCTGTGACTCTTGTTCACTTCCCACAGTGGGGTAGCATGTTCCTCCCTCCTTCAAAAGACATCAACAAATCCACTGAAGAATACTATTACACCGCTGAATGGAACGAGGATGAGAAGAAGAAGGGCTTGCACCAGCAGAGTCTCAAGTTTGCAGAGAATAGTCGCTCAGAGAGAGGCAAGCGTGTGGCCTCTGCACCAACACCACCAAATGCAACTCCCACACATGTTTAA 1593 0.4702 MAEIEGSPGSSMHGVTGREQTFIASVASPMVPTDTTAKFALPVDSEHKAKVFKLFSMANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKSDIGNAGVASVSGSIFSRLAMGAVCDLLGPRYGCAFLIMLSAPTVFCMSFVKDAAGYIAVRFMIGFSLATFVSCQYWMSTMFNSKIIGLVNGTAAGWGNMGGGATQLIMPLVYELIRRAGATPFTAWRIAFFIPGWLHVIMGILVLTLGQDLPDGNLGALQKKGDVAKDKFSKVLWYAITNYRTWIFALLYGYSMGVELTTDNVIAEYFYDRFNLKLHTAGIIAASFGMANLVARPFGGYASDVAARLFGMRGRLWTLWILQTFGGVFCIWLGRANSLPIAVLAMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLIFFSTNKFSTSTGLSLMGVMIVCCTLPVTLVHFPQWGSMFLPPSKDINKSTEEYYYTAEWNEDEKKKGLHQQSLKFAENSRSERGKRVASAPTPPNATPTHV. 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03935 530 Gene3D MFS general substrate transporter like domains 264 466 IPR036259 -
Seca3g03935 530 SUPERFAMILY MFS general substrate transporter 59 459 IPR036259 -
Seca3g03935 530 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 458 IPR020846 GO:0022857
Seca3g03935 530 FunFam Nitrate transporter 2.1 265 466 - -
Seca3g03935 530 MobiDBLite consensus disorder prediction 492 513 - -
Seca3g03935 530 FunFam High affinity nitrate transporter 57 254 - -
Seca3g03935 530 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 516 IPR044772 GO:0015112
Seca3g03935 530 MobiDBLite consensus disorder prediction 492 530 - -
Seca3g03935 530 Gene3D MFS general substrate transporter like domains 57 253 IPR036259 -
Seca3g03935 530 CDD MFS_NRT2_like 65 458 IPR044772 GO:0015112
Seca3g03935 530 Pfam Major Facilitator Superfamily 69 425 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03935 Seca-Chr3 74157363 74159296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03935 1 530 Inorganic Solute Cotransporters AT5G60770 80.943 0.0 903
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03935 K02575 - gmx:100807710 1010.75