Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca3g03931 | ATGGTTCTCCCAAACTTGTCTTCTTCTTCCTCTTCTCCTCCAACCAAGCAACCCAAACCCAGGAAAACTAAGACCCCTCTCCCTCTTAAAGCCAAGCAACCTTCTGTGACGGGCCACAAGGACCGCCACACCAAGGTGAATGGGCGAGAACGCCGTGTTCAGTTACCACCAATGTGCGCTGCTCGCATCTTCCAACTCACCAAAGAGTTAGGCTTCAAGAATGATGGCCAGACCATTGGGTGGCTCTTAAGCAAAGCTGAGCCCTCCATTATCGCTGCCACTGGCACCGGCATATTACCATCTTCCGTCGACAACTCAGACTCCGTAGCTGTTGCACCTGCATCTGAAGTACCTGAACCTGAACCTGCACCAGCACTTGCAACTGATGAGGACAAAACTGCTGTTGATCAGGAAGCAGAGGCGGTTGCCATGCCTGCAGCCATCAACCCTGAAGAAGAGTTTGATTCCGATTTTGATTGGTTAGTAAATTATGGTGTGGAGTTGGATGATGACCATGCATTGTTCCAATCATTCATGAAGCAGGTGGATTGA | 552 | 0.5 | MVLPNLSSSSSSPPTKQPKPRKTKTPLPLKAKQPSVTGHKDRHTKVNGRERRVQLPPMCAARIFQLTKELGFKNDGQTIGWLLSKAEPSIIAATGTGILPSSVDNSDSVAVAPASEVPEPEPAPALATDEDKTAVDQEAEAVAMPAAINPEEEFDSDFDWLVNYGVELDDDHALFQSFMKQVD. | 184 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca3g03931 | 183 | ProSiteProfiles | TCP domain profile. | 39 | 93 | IPR017887 | - | |
Seca3g03931 | 183 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Seca3g03931 | 183 | Pfam | TCP family transcription factor | 38 | 108 | IPR017887 | - | |
Seca3g03931 | 183 | MobiDBLite | consensus disorder prediction | 1 | 49 | - | - | |
Seca3g03931 | 183 | MobiDBLite | consensus disorder prediction | 35 | 49 | - | - | |
Seca3g03931 | 183 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 16 | 124 | IPR005333 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca3g03931 | Seca-Chr3 | 73788265 | 73788816 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca3g03931 | 9 | 103 | TCP Transcription Factor Family | AT1G69690 | 52.041 | 1.29e-28 | 106 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | TCP | Seca3g03931 | TCP | 4.4e-24 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca3g03931 | - | K16221 | var:108322003 | 126.716 |