Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03853 ATGGAATCAAACTTGACTCTCAAAGCTGGTCTTGAATTCGATAATTTAGAAGACGCATGGCAATTTTGGGTGAATTACGAAGGCATAAAAGGCTTTGGAGTTAGAAATCAATATTCAAGCAAGAGTAAGAAAGATGGTTCCGTTACGTCTTACTTATATGTTTGTTGTAAGGAGGGTGTACGAAAACTAGATTCAAGGGATTATAAAACGATCAATCCAAAACCCGAGACAAGAACATGGTGTATGGCAAGAATGAAAGTCAAACGATTCAATGAAAAATACAAAGTGATCAATTTTATTGATGATCACAATCACCCACTCCAACCACCAGAAACAATGCATATGTTAGCTTCTCAACGAAGAATAACTGAACATCAAGCATATGAACTTGAAGTGGCAGAAGATGCAGGGATTCAACAGAAAGCCTCGTTTGATTTGATGAGTAAATATGTAGGAGGCAGAGAGAATCTAGGGTATACTAGACAAGATGCAAAGAATTATTTGAATTCTTGGAGGCGGCGAGATATGGCTTATGGTGAAGCCAGGTATTTGCTATATTATTTCCAACAACAATTGATAGATAACCCTCCATTCTTCCATGCATACCAAATGGATTTGGAAGAGCGAATAACAAATGCATTTTGGGCTGATGCAAAAATGTTGTTTTACTATCATTGCTTTGGTGATGTCATTTCTTTGGATACCACATATTGTACAAATGGAGATCATCGACCCCTTGCAATTTTCTCGGGCTTCAACCATTATAGAGGATAG 774 0.3734 MESNLTLKAGLEFDNLEDAWQFWVNYEGIKGFGVRNQYSSKSKKDGSVTSYLYVCCKEGVRKLDSRDYKTINPKPETRTWCMARMKVKRFNEKYKVINFIDDHNHPLQPPETMHMLASQRRITEHQAYELEVAEDAGIQQKASFDLMSKYVGGRENLGYTRQDAKNYLNSWRRRDMAYGEARYLLYYFQQQLIDNPPFFHAYQMDLEERITNAFWADAKMLFYYHCFGDVISLDTTYCTNGDHRPLAIFSGFNHYRG. 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03853 257 Pfam FAR1 DNA-binding domain 21 109 IPR004330 -
Seca3g03853 257 PANTHER OS01G0519700 PROTEIN 6 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03853 Seca-Chr3 72202073 72202846 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g03853 FAR1 2e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03853 - - vun:114184605 432.565