Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03786 ATGGCTGGCGTTAATCCGAACGGCGGAGTCGCCGATTTTCCGGCGGTTCAAACGCACGGTGGACAGTTCATTCAGTACAACATATTCGGTAACCTCTTCGAGGTTACGGCCAAGTACCGTCCTCCGATCATGCCTATTGGTCGTGGCGCCTATGGAATCGTTTGTTCGCTGTTGAATACGGAGACGAATGAGTTGGTGGCTGTTAAGAAGATTGCGAACGCTTTCGACAATCACATGGACGCTAAGCGTACGCTCCGTGAGATTAAGCTTCTTAGACATTTGGATCATGAAAATGTAATTGGCTTAAGAGATGTTATTCCGCCACCCTTGCGTAGAGAGTTTAATGATGTCTACATAGCCACTGAACTCATGGATACCGATCTTCACCAAATCATTCGCTCCAATCAAAGTCTGTCAGAGGAGCACTGCCAGGTGAATGCTCTCAATTTAATTATCACCTTCTTTACAATATTCTACATTTTTATGCTGGAACTATCTTTTTGTCTTACTGATGAGTGGATGCTCTTGTACTTGCAGTACTTCTTGTATCAAATTCTTCGTGGACTAAAGTATATACATTCTGCAAACATAATCCATAGGGATTTGAAACCAAGCAACCTGTTGCTGAATGCAAACTGCGACCTGAAGATTATTGATTTTGGTCTTGCACGGCCAACTATAGAAAGTGACTTCATGACAGAATATGTAGTCACAAGATGGTATAGGGCTCCCGAATTGTTGTTGAACTCCTCAGATTACACCTCTGCGATAGATGTGTGGTCCGTTGGTTGCATCTTTATGGAGCTTATGAATAAAAAGCCTCTCTTTCCAGGCAAAGACCATGTGCATCAGATGCGCCTATTGACAGAGCTTCTTGGCACTCCAACTGAGGCAGACCTCGGGTTAGTGAAAAATGAAGATGTGAGAAGATATATCCGACAACTTCCTCAATATCCTCGCCAGCCTTTACATAAGGTCTTCCCCCATGTTCATCCCATGGCCATTGATCTCATCGATAAAATGTTGACAGTTGATCCAACCAGAAGAATTACAGTTGAACAAGCACTAGCCCATCCATACCTTGAAAAACTGCATGATGTAGCTGATGAACCAGTCTGCATGGAGCCATTCTCATTTGATTTTGAGCAACAGCACTTGGACGAAGAGCAAATAAAAGAGATGATCTACAGGGAGGCATTGGCACTCAATCCTGAGTATTCTTAA 1224 0.4346 MAGVNPNGGVADFPAVQTHGGQFIQYNIFGNLFEVTAKYRPPIMPIGRGAYGIVCSLLNTETNELVAVKKIANAFDNHMDAKRTLREIKLLRHLDHENVIGLRDVIPPPLRREFNDVYIATELMDTDLHQIIRSNQSLSEEHCQVNALNLIITFFTIFYIFMLELSFCLTDEWMLLYLQYFLYQILRGLKYIHSANIIHRDLKPSNLLLNANCDLKIIDFGLARPTIESDFMTEYVVTRWYRAPELLLNSSDYTSAIDVWSVGCIFMELMNKKPLFPGKDHVHQMRLLTELLGTPTEADLGLVKNEDVRRYIRQLPQYPRQPLHKVFPHVHPMAIDLIDKMLTVDPTRRITVEQALAHPYLEKLHDVADEPVCMEPFSFDFEQQHLDEEQIKEMIYREALALNPEYS. 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03786 407 Gene3D Phosphorylase Kinase; domain 1 16 144 - -
Seca3g03786 407 FunFam Mitogen-activated protein kinase 25 134 - -
Seca3g03786 407 ProSiteProfiles Protein kinase domain profile. 40 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g03786 407 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
Seca3g03786 407 SMART serkin_6 40 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g03786 407 FunFam Mitogen-activated protein kinase 162 388 - -
Seca3g03786 407 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 39 363 - -
Seca3g03786 407 Pfam Protein kinase domain 45 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g03786 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Seca3g03786 407 Gene3D Transferase(Phosphotransferase) domain 1 175 388 - -
Seca3g03786 407 SUPERFAMILY Protein kinase-like (PK-like) 45 369 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03786 Seca-Chr3 70463632 70466502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03786 4 407 MAP Kinase Gene Family AT3G45640 76.790 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Seca3g03786 Pkinase 2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03786 K20536 - gmx:100801339 707.597