Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03772 ATGGAAAATAATGCTACTGAATCTGAGAAAATGAAAGGGAAAGGGATTCCCGTTCACGGAGGGAAGTACATGCATTACAACATCTTGGGCAACCTTTTCGAGGTCTATGCTAAATACGCTCCCCCTCTCCAACCCGTTGGACGCGGCGCATACGGCATCGTTTGCTGTGCAACGAATTCGGAGACGAAAGAAGGCGTTGCAATAAAGAAGATCGGGAATGCCTTTGACAACAGGATTGATGCTAAGAGGACACTCAGAGAAATCAAACTTCTTTGCCACATGGACCATGATAACGTGCGCCTTAATTTTTTGTTTTGTTCATCATTTTTTGAAATGATGAATTTGCATCATGTTTGTTAG 360 0.4306 MENNATESEKMKGKGIPVHGGKYMHYNILGNLFEVYAKYAPPLQPVGRGAYGIVCCATNSETKEGVAIKKIGNAFDNRIDAKRTLREIKLLCHMDHDNVRLNFLFCSSFFEMMNLHHVC. 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03772 119 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 38 105 - -
Seca3g03772 119 SUPERFAMILY Protein kinase-like (PK-like) 43 99 IPR011009 -
Seca3g03772 119 Pfam Protein kinase domain 44 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g03772 119 Gene3D Phosphorylase Kinase; domain 1 17 118 - -
Seca3g03772 119 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
Seca3g03772 119 FunFam Mitogen-activated protein kinase 25 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03772 Seca-Chr3 70141172 70141900 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03772 9 99 MAP Kinase Gene Family AT1G07880 72.527 2.21e-46 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Seca3g03772 Pkinase 1.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03772 K04371 - gmx:100802929 184.882