Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03771 ATGCCATCGCAGTATTTTCTATATCAACTCCTGAGAGGATTGAAGTACATACACTCTGCCAACGTTTTGCACCGAGATCTAAAACCAAGCAATTTACTTCTCAATGCAAACTGTGATCTCAAAATATGTGACTTTGGGCTTGCCAGAACAACCTCTGAGACAGACTTTATGACAGAATATGTTGTGACTCGTTGGTACAGAGCCCCTGAATTGCTACTGAATTGTTCAGAATATACTGCAGCTATTGATATATGGTCTGTTGGTTGCATTTTGATGGAGATAATTAGAAGGGAGCCTTTATTTCCTGGTAAAGATTATGTTCAGCAGTTGGCTCTCATAACTGAGTTACTAGGTTCACCAAATGACTCAGATCTTGGATTCCTTAGAAGTGATAATGCAAAGAAATATGTTAAGCAGCTCCCACATGTAGAAAAGCAGCCCTTTTCACAGCGGTTTCCTGATGTGTCCTCGTTGGCAATTGATCTTGCTGAGAAAATGTTGGTTTTTGATCCCTCCAAACGCATAACTGTCGAGGAAGCACTGAATCACCCATATATGTCAAGTCTTCATGAGATCAACGAGGAGCCCACTTGTCCAACTCCTTTTGTCTTTGATTTCGAACAGACAATTCTGAATGAAGAAGATATAAAGGAACTCATATGGAGGGAGTCTCTGAACTTCTGCCAGGATCAGATGCTGGAATAG 705 0.4085 MPSQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILMEIIRREPLFPGKDYVQQLALITELLGSPNDSDLGFLRSDNAKKYVKQLPHVEKQPFSQRFPDVSSLAIDLAEKMLVFDPSKRITVEEALNHPYMSSLHEINEEPTCPTPFVFDFEQTILNEEDIKELIWRESLNFCQDQMLE. 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03771 234 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 4 187 - -
Seca3g03771 234 FunFam Mitogen-activated protein kinase 2 213 - -
Seca3g03771 234 Gene3D Phosphorylase Kinase; domain 1 214 223 - -
Seca3g03771 234 ProSitePatterns Serine/Threonine protein kinases active-site signature. 22 34 IPR008271 GO:0004672|GO:0006468
Seca3g03771 234 SUPERFAMILY Protein kinase-like (PK-like) 4 192 IPR011009 -
Seca3g03771 234 Gene3D Transferase(Phosphotransferase) domain 1 4 213 - -
Seca3g03771 234 Pfam Protein kinase domain 5 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g03771 234 ProSiteProfiles Protein kinase domain profile. 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g03771 234 SMART serkin_6 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03771 Seca-Chr3 70137878 70139361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03771 4 227 MAP Kinase Gene Family AT1G07880 83.036 1.72e-143 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Seca3g03771 Pkinase 3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03771 K04371 - gmx:100802929 452.981