Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03745 ATGGACACACACTGCAACACCGCATTCTCACGCGCCGGCCACTTTGTGTCGCCGCAGGATGCATCGACGGTGTCGCCAATGCACTACTCCACCATTCCTCAGCTGCACTACGAGTCACTCTCGCAACTCAACTTGGAGGTGAGTTCCAATGCCAATAATAGCTGTAGCAGCGGGTGCACCAGCTACGTTGGGTCACCGAGTTCGCTGGCGAGTTATGAGACTCAACGAGCCTGCTTGATGCAGAGGAGCGTTAGCAGCCACTCGCTGCTGAAGAATAATGGGGTCCACTACAACCCCTTTTCTCCTCTGTTTGCTGAGTTATTGGACTCAGGGGACGGTCCGGTGCGGAGAGTTTACAGTACCGGTGATCTGCAGAGAATTAATGGAATGCAACATTTTCATCAGTCAGATAGTCCTTTGTCAACTGAGAGTAGTATGATACTAGAAGGAATGGCCAGAACCAGTCCTTACAGCCCAGAGGAGAAGAAGGTGAGGATTGAGAGATATAGAAGCAAGAGAAACCAGAGGAACTTCACCAAGAAAATTAAGTATGCTTGCAGGAAGACATTGGCAGACAGCAGGCCACGTATCAGAGGACGATTTGCTAGGAATGATGAAATTGCAATGAACCCTCCTGTTAGTGTTGAGTGGAGCAATAATAGTACTGGAGAGGAAGAAGATGAGGAAGAGGAGAATTGGGTCAATTTCTTTGATTCCTTGGTTCCTGCAAATAATCTTCCTCAGGACCCTCAAGGCAGTACTTCTTCCTTTGGTGTGTTCTATTAA 786 0.4835 MDTHCNTAFSRAGHFVSPQDASTVSPMHYSTIPQLHYESLSQLNLEVSSNANNSCSSGCTSYVGSPSSLASYETQRACLMQRSVSSHSLLKNNGVHYNPFSPLFAELLDSGDGPVRRVYSTGDLQRINGMQHFHQSDSPLSTESSMILEGMARTSPYSPEEKKVRIERYRSKRNQRNFTKKIKYACRKTLADSRPRIRGRFARNDEIAMNPPVSVEWSNNSTGEEEDEEEENWVNFFDSLVPANNLPQDPQGSTSSFGVFY. 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03745 261 ProSiteProfiles CCT domain profile. 162 204 IPR010402 GO:0005515
Seca3g03745 261 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 18 225 IPR045281 GO:0009909
Seca3g03745 261 Pfam CCT motif 164 204 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03745 Seca-Chr3 67660878 67663767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03745 150 203 C2C2-CO-like Transcription Factor Family AT5G24930 50.000 1.17e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca3g03745 CCT 1.4e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03745 - - aprc:113859774 369.777