Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03742 ATGTGGGATTGCAGAGAACTTGGCTTAATTATCTGTGCTTTATCAATCTTGCCCTTGGTATGCTTTTCTGCCAACTTTGTTCCTATTGATAATTACCTTATAGACTGTGGAGCCACTACCAATACTTCAATAGATAGCGGAAATTTCACAGCTGATAATTTCTTTAAGAAATTCCTTTCCACCCCACAAGATATCCTTGCCAGTATCTCCTTAAAATCAATCACTTCCTCTAGTGATTCACCTCTCTATCAAACGGCAAGGATTTTCACTGCACCTTCAAAATACACATTTCCTATTAACAAAAAGGGGAGACATTGGATCCGTCTTTATTTCTTTCCATTTGCATATCAAAATTACAATTTGAGTGCTGCAAATTTTGCTGTCACCACCCAAAACAATGTCCTTCTCAGTAACTTCAGTGTGCAGAAAAATCCTGTTATGAAGGAGTACTCAGTGAATGTGACCTCAGACACACTTGATATCACCTTTGCCCCTTCAACCAATTCCATTGCTTTTGTGAATGCCATTGAAGTTGTTTCTGTCCCTGATGAACTCATTACTGATGACGCTTTCACCCTAAACCCACGAACAAGCTACTCTGGGTTGTTGACACAATCACTGGAGACAGTTTTCAGGGTTAATATGGGTGGTTCAATTGTCTCCTCTGGCAGTGACCCTCTTCATCGAACTTGGGTTCCAGATAAAAGCTTCCTTATACAACCTAACCTAGCCAGTAATTTTTCAAGTATAGGTGCTGTTAAATATGTTAATGGTGGGCCAACAGAAAATATTGCACCACCTGCTGTCTATGGTACTCTAATACAGATGAACTCAGAAAGTGATCCCCGTAGTAATTTCAATGTCACCTGGAAGTTTGATGTGGAACCTGGATTTCAGTACCTTGTTCGTTTTCACTTCTGTGACGTAGTCAGCAAAGGTCTTAATGAACTCTATTTCAATGTTTACATTGACTCCTTGTTAGCTGACAAGGATCTTGATCTCAGTCTAGAAAATAATAATGTTTTGGCAACTCCATATTACTTGGATTTGGTTACAGCCCCAGCTGTCAGCAATAAAATTCTTGTAAGTATTGGCCCTTCTTCTCTCAATACTGATTATCCTAATGCTATTTTGAATGGGCTGGAGATCATGAAAATGAACAACTCTATGAGCAGTCTCAGTGCATCAACAGCTGTGCCTTTGACTAGTGATTCTAGTTCAAATTCTAAGAAAGTTGGCATCATAGTGGGTGTGAGTCTTGGAGCATTTGTTGCAGTGGTCTTGGTTGGAATTTTCTTTGTACTCTGCAGAAAAAGGAGACGGTTGGCACGAGAAGCGCATTCAAAGACATGGATTCCTTTATCAATCAACGATGGAACTTCTCACACAATGGGAAGCAAATATTCAAATGGCACAACATTGAGTGCTGCTTCAAATTTTGGGTATCGCATCCCTTTTGTGGCAGTTCAGGAAGCTACAAACAATTTTGATGAGAGTTGGGTTATTGGCATAGGTGGTTTTGGTAAGGTATACAAGGGAGAATTAAATGATGGCACTAAAGTTGCAGTTAAGAGGGGAAATCCTCGGTCCCAGCAGGGGCTTGCAGAGTTCCGAACTGAAATTGAAATGCTGTCTCAGTTCCGCCATCGCCATCTGGTATCATTGATTGGGTATTGTGATGAAAAGAATGAAATGATCTTGATATATGAATATATGGAGAAGGGAACTCTCAAGAGTCATTTGTATGGTTCAGGTCTCCCAAGCTTAAGTTGGAAGGAGAGACTTGAGATATGCATTGGAGCTGCTAGAGGACTCCATTACCTCCATACTGGCTATGCTAAAGCAGTTATTCACCGTGATGTGAAGTCTGCAAATATCCTGCTTGATGAGAACCTCATGGCCAAAGTTGCTGATTTTGGGCTATCAAAGACTGGGCCTGAAATTGATCAGACACATGTGAGCACAGCTGTCAAAGGGAGTTTTGGGTACCTTGATCCTGAGTATTTCAGGAGGCAACAGTTAACAGAAAAGTCGGATGTGTATTCATTTGGAGTAGTCCTGCTGGAGGTTCTTTGTGCAAGACCTGTCATAGATCCATCCCTTCCTAGAGAAATGGTGAACTTGGCAGAATGGTCAATGAAATGGCAGAAAAAAGGGCAATTGGAGCAAATCATAGATCCAATTCTTGCGGGGAAAATCAGACATGATTCTCTTAGGAAGTTTGGAGAAACTGCTGAAAAATGCTTGGCTGACTTTGGTGTTGACAGGCCTTCTATGGGAGATGTCTTGTGGAATTTGGAGTATGCTCTCCAACTCCAAGAGGCTGTTGTTCAAGGTGACCCTGAAGAAAACAGTACCAATATGATTGGTGAACTCTCTCCACAGGTCAACAATTTCAACCACGAAGTAAGTGTTTCTGCAGCACAATTTGAAGCTTCAAGTCTTGATGATCTGTCTGGTGTTTCTATGAGTAAGGTATTCTCACAGCTGGTGAAATCTGAGGGGAGGTGA 2511 0.4122 MWDCRELGLIICALSILPLVCFSANFVPIDNYLIDCGATTNTSIDSGNFTADNFFKKFLSTPQDILASISLKSITSSSDSPLYQTARIFTAPSKYTFPINKKGRHWIRLYFFPFAYQNYNLSAANFAVTTQNNVLLSNFSVQKNPVMKEYSVNVTSDTLDITFAPSTNSIAFVNAIEVVSVPDELITDDAFTLNPRTSYSGLLTQSLETVFRVNMGGSIVSSGSDPLHRTWVPDKSFLIQPNLASNFSSIGAVKYVNGGPTENIAPPAVYGTLIQMNSESDPRSNFNVTWKFDVEPGFQYLVRFHFCDVVSKGLNELYFNVYIDSLLADKDLDLSLENNNVLATPYYLDLVTAPAVSNKILVSIGPSSLNTDYPNAILNGLEIMKMNNSMSSLSASTAVPLTSDSSSNSKKVGIIVGVSLGAFVAVVLVGIFFVLCRKRRRLAREAHSKTWIPLSINDGTSHTMGSKYSNGTTLSAASNFGYRIPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMEKGTLKSHLYGSGLPSLSWKERLEICIGAARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEVLCARPVIDPSLPREMVNLAEWSMKWQKKGQLEQIIDPILAGKIRHDSLRKFGETAEKCLADFGVDRPSMGDVLWNLEYALQLQEAVVQGDPEENSTNMIGELSPQVNNFNHEVSVSAAQFEASSLDDLSGVSMSKVFSQLVKSEGR. 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03742 836 FunFam Putative receptor-like protein kinase 31 182 - -
Seca3g03742 836 Gene3D Transferase(Phosphotransferase) domain 1 572 789 - -
Seca3g03742 836 FunFam Receptor-like protein kinase FERONIA 206 388 - -
Seca3g03742 836 ProSitePatterns Protein kinases ATP-binding region signature. 502 524 IPR017441 GO:0005524
Seca3g03742 836 FunFam Receptor-like protein kinase FERONIA 572 787 - -
Seca3g03742 836 Gene3D Phosphorylase Kinase; domain 1 458 571 - -
Seca3g03742 836 CDD STKc_IRAK 502 767 - -
Seca3g03742 836 ProSiteProfiles Protein kinase domain profile. 496 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g03742 836 Gene3D - 31 181 - -
Seca3g03742 836 Gene3D - 205 388 - -
Seca3g03742 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Seca3g03742 836 SUPERFAMILY Protein kinase-like (PK-like) 473 767 IPR011009 -
Seca3g03742 836 PANTHER OS07G0166700 PROTEIN 483 773 IPR045272 GO:0004714|GO:0006468
Seca3g03742 836 Pfam Malectin-like domain 34 386 IPR024788 -
Seca3g03742 836 SMART serkin_6 496 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g03742 836 FunFam receptor-like protein kinase FERONIA 460 571 - -
Seca3g03742 836 Pfam Protein tyrosine and serine/threonine kinase 501 695 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03742 Seca-Chr3 67620106 67622959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03742 6 836 Receptor kinase-like Gene Family AT3G46290 66.627 0.0 1117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Seca3g03742 Malectin_like 2.6e-41 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03742 - - gmx:100806488 1442.56