Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03734 ATGTCAAGAAAAGGAATGAGAAGCATCTTCTTCAAACCATCACCTCCTCCTCCATCCACTTCGCCATTCCCACCTTCCTCTCCTCTTCGCACCTTCTCAGACTCCATAATGGAAGAAAACATCGAAACCGCAGAGTTGCTCATAACCAAATGGGACACCAACCAATCCAAAATCATCACCCCTCTTTTCAGCGGCACCCGTGAGGAAGCCAAACAGTACCTAAACGCTGTCAAGGGACTACAATCCGCTATGCAGTACCTCGTCACACGTGATTCCACCTCCAACACGCTCGTACGAGCTCAGTCCTTAATGCAACTCGCCATGAAAACGCTCCAGAAGGAATTCTACCAGATACTATCCGCAAACAGGGACCACTTAGACCCTGAAACCGTCTCCGCCCGTTCCTCCGTCGACCACAGAAGCAGCGTCTCCGATTACGACGACGAAATCTCCGAGGACGAGTTTCGCGTTGCCGGAAACTCCATCTCAGAGACGGAGAGGGTTTCCATGCTCACCATGGCGGATTTGAAGGCAATCGCCGATTGCATGATTTCCTCTGGCTACGGCAAAGAGTGCGTCAAGGTTTACATCATCATGAGAAAATCGATTGTGGATGAGGCACTGTATCATCTCGGAGTGGGACAATTGAATTTTTCTCAGGTCCAGAAGATGGATTGGGAGGTGCTGGAGTTGAAGATCAAGAGCTGGTTGAACGCCGTGAAGGTCGCCGTCGGGACTCTGTTCTACGGCGAGAGGATCCTCTGCGATCACGTCTTCGCCGCGGCTTCGGGGAAGAGAATCCCTGAGTCCTGTTTCGCAGAGATTACCAGACAGGGCGCTGAAATGCTGTTTGGATTCCCGGAAATGGTGGCAAAGTGCAAGAAAACGCCCGAGAAAATGTTCAGGACTTTGGATTTATACGAAGCAATCTCTGACCACTGGCCACAAATCGAGTCCATCTTTTCCTTCGAATCAACCTCCAATGTCCGTTCTCAAGCCGTTACGTCCTTGGTCAAACTCGGTGAGGCCGTTAGAACGATGCTAACGGACTTTGAATCGGCAATTCAGAAGGATTCCTCGAAGAAGCCTGTCCCTGGCGGCGGGGTCCACCCTCTCACGCGCTATGTCATGAACTACATCACCTTCCTCGCTGATTACAGCGGCGTGCTCGCTGATATCGTCGCCGATTGGCCGCAATCTCCGTTGCCGGAGTCTTACTATCGAAGCCCCATGCGGGAGGAAAATCCTTCGTCTTCGGAGATATCGGAGCGGATCGCGTGGCTTATACTCGTCGTGCTCTGCAAGCTTGATGGCAAAGCGGAACTCTACAAGGACGTGGCGCTTTCTTACCTTTTCTTAGCCAACAACATGCAATACGTCGTCGTAAAGGTTCGAAAATCGAACCTAGGGTTTCTTCTCGGCGAGGATTGGTTGGCGACGCACGAATTGAAGGTTAGAGAGTACGTGTCCAAGTATGAGCACGTGGCGTGGAGCAGAGTGATGTCAGCGTTGCCGGAAAATCCCATGGCGGAGATGCCGGCGGAGCAAGCCAGAGCCTGCTTCGTGAGCTTCAACGCTGCGTTCCATGAAGTGTGCAAGAAACAGTCTTCGTGGATCGTATCCGACCCGAAACTGAGAGACGAAATCAAAGTGTCGATAGCTTCGAAGCTGGAGCACAAGTACAGTGAATTCTTTGAGAGAAATCGGGTCGGGTCGGAAGCAGTTATAAGTTTGTTGCCCGATGATATTGGGAATTACTTGTCTGACATTTTGTATGGGATTGGAGATTCGGGTAGCGTCTCTTCACATTCTTCGTCGACGACGTCGTCTTCACATCGCTCCAATCGCCGGTGA 1854 0.5135 MSRKGMRSIFFKPSPPPPSTSPFPPSSPLRTFSDSIMEENIETAELLITKWDTNQSKIITPLFSGTREEAKQYLNAVKGLQSAMQYLVTRDSTSNTLVRAQSLMQLAMKTLQKEFYQILSANRDHLDPETVSARSSVDHRSSVSDYDDEISEDEFRVAGNSISETERVSMLTMADLKAIADCMISSGYGKECVKVYIIMRKSIVDEALYHLGVGQLNFSQVQKMDWEVLELKIKSWLNAVKVAVGTLFYGERILCDHVFAAASGKRIPESCFAEITRQGAEMLFGFPEMVAKCKKTPEKMFRTLDLYEAISDHWPQIESIFSFESTSNVRSQAVTSLVKLGEAVRTMLTDFESAIQKDSSKKPVPGGGVHPLTRYVMNYITFLADYSGVLADIVADWPQSPLPESYYRSPMREENPSSSEISERIAWLILVVLCKLDGKAELYKDVALSYLFLANNMQYVVVKVRKSNLGFLLGEDWLATHELKVREYVSKYEHVAWSRVMSALPENPMAEMPAEQARACFVSFNAAFHEVCKKQSSWIVSDPKLRDEIKVSIASKLEHKYSEFFERNRVGSEAVISLLPDDIGNYLSDILYGIGDSGSVSSHSSSTTSSSHRSNRR. 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03734 617 MobiDBLite consensus disorder prediction 11 25 - -
Seca3g03734 617 FunFam Exocyst subunit Exo70 family protein 56 599 - -
Seca3g03734 617 MobiDBLite consensus disorder prediction 598 617 - -
Seca3g03734 617 Gene3D Exocyst complex component Exo70 47 596 - -
Seca3g03734 617 PANTHER EXOCYST COMPLEX PROTEIN EXO70 31 587 IPR004140 GO:0000145|GO:0006887
Seca3g03734 617 SUPERFAMILY Cullin repeat-like 43 589 IPR016159 -
Seca3g03734 617 Pfam Exo70 exocyst complex subunit 234 589 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca3g03734 617 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03734 Seca-Chr3 67315272 67317125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03734 10 593 EXO70 exocyst subunit family AT5G59730 50.492 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03734 K07195 - gmx:100808078 936.021