Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03706 ATGGTAAAGGGTTCTGGACACACTAATGACAGAGCGGCAGTATTTGATAATCCTTCCAAAATTGAATCAAAACGACCTCATCAATGGTTTGTTGATGCTGCTGAAGTAGATTTTTTTCCAAACAAGAAACAAGCAGTAGAAGATGCAGATGAAAAATCTAGTTCAGGATTTTCAAATGTAAATTTTACTCCCTGGGAGAACAATCCCAATTTTCATTCAGTCCCAAGCCAATTTATTGGTCGGTTATTTGGTTCTGAAACTAGGCCTGTCAATATCACTGAAAAGAATACATCTTATGTTTCGACTGATGATTCTAATGTGAGATCAAAGATGATAACCAATCAATATGGAGATGATGCATCTTTTGGCTTGTCTATATCTCATTCTGTTGAAGATTCTGAAGCATGCACAAATTTTGGTGGAATAAAAAAAGTCCAAGTGAATCAGGTTAAGGATTCTGATGACGTACGGGCTCCAGAGGGACATAATTTTAATAGGCAGAGTAATGGTGATCTACATAAGGCCTATAATGGGGAAGTTGAGACCGGGTCTGCATCAATAGGGCAAGCCTTTGACAAGGATGGTAATGTCACTTTAATGGGACTCACCTACGGCAAAGGGGATGCCCATGTCAGATCATTTGGTGCCCCCTTTGGCAAAGGAGATGACACAGTCATATCAATTGGTGAATCCTATAATAAAGAGGACACTAATATAATCTCTTTTGGTGGGTTCTCAGATGAACGGGACATTATCTCTGTGGGCAGGCCTGCTACAGACTATGAACAATTATATAATCAATCTTCTGTCCATGTGTCAACAACAGCTAATGAGAAAGAGTTGGATGCATCAAATTCTGATGCAGTTGCAAGTACTCCCCAGGTAGGAACAGTAAAGTCTGGAACTGTGTCCAAGAATAAACAAGAGTTCAAAACAGCCAGGAAAGAAGCTCCAAACAGCTTCCCTTCTAATGTCAGGAGCTTGATATCTACTGGTATGCTTGATGGCGTTCCTATTAAGTATGTCTCAGTGGCACGGGAGGAACTTCGTGGAATTATAAAAGGCTCTGGCTATCTTTGTGGGTGTCAGTCCTGTAACTATTCTAAGGGTCTGAATGCTTATGAGTTTGAGAGACATGCTGGTTGCAAAACGAAACATCCAAATAATCACATTTATTTTGAGAATGGGAAGACTATTTATCAAATAGTACAGGAATTGAGGAGTACCCCTGAAAGTTTGTTGTTTGATACAATTCAAACAGTTTTTGGATCACCAATTAATCAGAAAGCATTTCGCAATTGGAAAGAATCATTTCAAGCAGCTACACGTGAGCTTCAACGCATTTATGGAAAGGAAGAATTTAACTTATAA 1371 0.3917 MVKGSGHTNDRAAVFDNPSKIESKRPHQWFVDAAEVDFFPNKKQAVEDADEKSSSGFSNVNFTPWENNPNFHSVPSQFIGRLFGSETRPVNITEKNTSYVSTDDSNVRSKMITNQYGDDASFGLSISHSVEDSEACTNFGGIKKVQVNQVKDSDDVRAPEGHNFNRQSNGDLHKAYNGEVETGSASIGQAFDKDGNVTLMGLTYGKGDAHVRSFGAPFGKGDDTVISIGESYNKEDTNIISFGGFSDERDIISVGRPATDYEQLYNQSSVHVSTTANEKELDASNSDAVASTPQVGTVKSGTVSKNKQEFKTARKEAPNSFPSNVRSLISTGMLDGVPIKYVSVAREELRGIIKGSGYLCGCQSCNYSKGLNAYEFERHAGCKTKHPNNHIYFENGKTIYQIVQELRSTPESLLFDTIQTVFGSPINQKAFRNWKESFQAATRELQRIYGKEEFNL. 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03706 456 Pfam Tify domain binding domain 351 406 IPR032308 -
Seca3g03706 456 MobiDBLite consensus disorder prediction 277 303 - -
Seca3g03706 456 PANTHER AUTOIMMUNE REGULATOR 12 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03706 Seca-Chr3 66873640 66877300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03706 311 439 PHD Transcription Factor Family AT3G53680 53.846 3.16e-40 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03706 - - gmx:100802229 805.823