Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03677 ATGGCGCAGTACAGAAGAATGGAGGCTGGTTCGGCTTCATTTCCGAAGGCATGGAGTTTGTTCTTAAGTTCACGATTATTGTTCTGTTTTCAGGTGTTAAAGGATGGCCTCTCTGCTGTGCATGTGCCTTACGCATATGGATTTGCTATCATATTGCTCACTGTTATAGTGAAAGCCGCTACACTTCCCTTGACAAAGCAACAGGTCGAATCAACACTGGCTATGCAAAATCTTCAACCAAAAATTAAGGCCATTCAAGAAAGATATGCCGGCAATCAGGAAAGAATACAACTTGAGACTTCAAGACTATATAGGCAGGCTGGGGTTAACCCTTTGGCAGGTACCTTTTTATCTTCTCAAAAGATGATGTCATCATTTTGTATAGGTTGTTTACCAACTTTGGCTACAATTCCAGTCTGGATTGGTCTCTACCAAGCTTTATCAAATGTGGCAAATGAGGGACTGTTAACAGAAGGCTTCTTGTGGATTCCCTCTCTGGGTGGTCCTACTACCATTGCTGCTAGACAAAGTGGATCTGGAATTTCTTGGCTTTTTCCATTTGTGGTAAGAAAAATATCTTTTCCTTCTGAAGATGGTCATCCACCTCTGGGTTGGCAGGATACTGCAGCATATCTTGTTTTACCTATTCTTCTTGTTGTTAGTCAATACGTTTCAATGGAAATCATGAAACCACCTCAGACGAACGATCCTACTCAAAAGAATACACTCCTTATTTTCAAGTTTCTCCCACTCATGATCGGTTACTTCTCACTGTCTGTCCCATCAGGACTAACAATTTACTGGTTTACAAACAATGTCTTGAGCACAGCTCAACAAGTATGGTTGCGTAAATTAGGAGGTGCAAAGCCTGTTGTGAATGAAAATGCTAGTGGAATTATTACTGCAGGACGGGCTAAAAGATCAGCTTCTCAGACTGCAAGGTCTGGTGAAAGGTTTAAGCAGTTGAAAGAAGAGGAGAAGAAAAAATTAAACAAGGCACTGCCAGTGGAGGAACTCCAACCTCTGGCTTCTGCTCCTGCTTCTGATGATGGATCGGATGTAGAGAGCGACAACAAGGAAGTTGCAGAAGAAGCATATGCTTCTAAAGTTAGCGAAGAGGTTCAAAGTTTTTCTAGGGACAGAAGAAGTAAGCGTTCGAAGCGGAAGCGTGCTGTATAA 1179 0.4215 MAQYRRMEAGSASFPKAWSLFLSSRLLFCFQVLKDGLSAVHVPYAYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYRQAGVNPLAGTFLSSQKMMSSFCIGCLPTLATIPVWIGLYQALSNVANEGLLTEGFLWIPSLGGPTTIAARQSGSGISWLFPFVVRKISFPSEDGHPPLGWQDTAAYLVLPILLVVSQYVSMEIMKPPQTNDPTQKNTLLIFKFLPLMIGYFSLSVPSGLTIYWFTNNVLSTAQQVWLRKLGGAKPVVNENASGIITAGRAKRSASQTARSGERFKQLKEEEKKKLNKALPVEELQPLASAPASDDGSDVESDNKEVAEEAYASKVSEEVQSFSRDRRSKRSKRKRAV. 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03677 392 MobiDBLite consensus disorder prediction 303 392 - -
Seca3g03677 392 Pfam 60Kd inner membrane protein 46 284 IPR028055 -
Seca3g03677 392 NCBIfam membrane protein insertase YidC 46 283 IPR028055 -
Seca3g03677 392 PANTHER OXA1 10 329 IPR001708 GO:0016020|GO:0032977
Seca3g03677 392 MobiDBLite consensus disorder prediction 311 334 - -
Seca3g03677 392 CDD 5TM_YidC_Alb3 47 284 IPR047196 -
Seca3g03677 392 MobiDBLite consensus disorder prediction 352 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03677 Seca-Chr3 66243688 66250864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03677 17 334 Chloroplast and Mitochondria Gene Families AT2G28800 68.025 1.44e-149 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03677 K03217 - gmx:100817173 549.28