Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03675 ATGGCTGGGAAAGGTGAGGGTCCGGCTATCGGAATCGATTTGGGAACGACTTACTCTTGCGTTGGTGTTTGGCAGCACGATCGTGTTGAAATCATCGCCAACGATCAGGGTAACAGAACCACTCCATCCTATGTGGCTTTCACTGACACAGAGCGCTTGATCGGCGATGCGGCCAAGAACCAGGTCGCTATGAACCCAACCAACACTGTTTTTGGTAAGTACTTTCAGAGCCATCTCTCGTTTCTTGTTTTTCTGCGATTTTTACTATCTTTCAGTGATTCTGTAACTTAA 291 0.4708 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFGKYFQSHLSFLVFLRFLLSFSDSVT. 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03675 96 PANTHER HEAT SHOCK PROTEIN 70KDA 9 72 IPR013126 GO:0005524|GO:0140662
Seca3g03675 96 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Seca3g03675 96 FunFam Heat shock 70 kDa protein 1A 2 83 - -
Seca3g03675 96 Gene3D - 2 82 - -
Seca3g03675 96 SUPERFAMILY Actin-like ATPase domain 8 73 IPR043129 -
Seca3g03675 96 PRINTS 70kDa heat shock protein signature 36 48 - -
Seca3g03675 96 PRINTS 70kDa heat shock protein signature 58 66 - -
Seca3g03675 96 PRINTS 70kDa heat shock protein signature 8 21 - -
Seca3g03675 96 Pfam Hsp70 protein 9 71 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03675 Seca-Chr3 66208091 66208381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03675 1 71 Calmodulin-binding Proteins AT5G02500 95.775 3.59e-46 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03675 K03283 - sspl:121761843 149.443