Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03673 ATGGATGTGGAGGCAGAAAATACTATTCTTGTGGAAGAGAATGAAGAGCTTGAAAAATCTTTAGTTGATATTGATGAGCGAATTCCAAAGGTTGGTATGATATTGGAATTTGAAGAGGAGCTTCATGCTTTTTATAAGAAATATGCTTATGAAGTTGGATTTGGGGTTCGAAAAATTAGCACAAGAACGGATGGTAAAGTCAAGTATTATTCTCTTGGATGTTCCAAAGGAGGCAAATATGTAAGTAGAGCAAGTTCTTCTAAGTTTAGATTGTCTAGCAAAACTGAATGTCAAGCAAAAATTTCTGTGATTGTTCATAGCAGTGGAAATTGTACTATTTCTCGTGTTAATCTAGAGCATAATATGAGTTGGGACCATAGTAGACAAGCTACTGTAACAAGTTTTGATCATGCAACAGAATCAAGTAAAAAATTACTCCCTCCCTTACAAGTGCGCAGCAAAGGTCGTCCACCATCCAAGAGAAAGGAATCCAAAGTAGAGAAAATAATGAAGACAAAAAAGAAGAAAAAAGAGCTTTATGAAGAAAAACAAGGCATTGGACAAGATCACACAAATCTAACAGGGATGACTTACAATTTCAACCATATAGATAGTCAGACTATCCCAACACACCACGTGACAAATCAATATGAAATATGGGAAAGTGTCATATTTGCTGGACAATCACAGGAGCATCAAGAGTATGGGATAATGGCCTTTACTGAGAGAAGCTTTGATCTCAATCATTAA 750 0.3587 MDVEAENTILVEENEELEKSLVDIDERIPKVGMILEFEEELHAFYKKYAYEVGFGVRKISTRTDGKVKYYSLGCSKGGKYVSRASSSKFRLSSKTECQAKISVIVHSSGNCTISRVNLEHNMSWDHSRQATVTSFDHATESSKKLLPPLQVRSKGRPPSKRKESKVEKIMKTKKKKKELYEEKQGIGQDHTNLTGMTYNFNHIDSQTIPTHHVTNQYEIWESVIFAGQSQEHQEYGIMAFTERSFDLNH. 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03673 249 Coils Coil 162 182 - -
Seca3g03673 249 Coils Coil 7 27 - -
Seca3g03673 249 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 173 - -
Seca3g03673 249 Pfam FAR1 DNA-binding domain 44 122 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03673 Seca-Chr3 66174208 66175602 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g03673 FAR1 4.3e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03673 - - ecad:122587955 118.242