Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03658 ATGGGTAACGGAATAGGAAAGCTAACGGTGTGCTTCACGGGAAACGGAGGAGGCGGCGGTGGCCGGAAACAGGACATATCTTTCTTGATAACGGAGCCACTGGACGAGGGGCTTGGTCACTCTTTCTGCTATGTTAGACCCGACCCGACCCGGATTTCGTCGTCAAAGGTCCACTCGGAAGAAACCACGACTTTCAGAACGATCTCCGGCGCATCTGTGAGCGCGAACACTTCGACGCCGTTATCGACGGCGTTTGTGGACCTTTACTCCTACGGTTGCATCGATAGAGCTGCGGCTTTCGAGAGTTCAACGTCCTTCGCTTCGCTTCCTCTGCAACCTATTCCCAGAAATATGATGAATTCGGGTCCCTTCTCAGGGAACCTTGGAGGTGGGTTTCCGAGTTCGGGTCCTCTGGAGAGAGGGTTCATGTCGGGTCCTATTGAACGCGGGTTCATGTCCGGTCCTATTGATCGTGGGTTGTTTTCGGGTCCGATGGAAAAGGATAGCTCTGACCAGTTTCAGAGAAGCTTCTCACATGGTGGTTTGGGGTTTACCGTGAGACCCAGGTCGCGGAAGGGTCGGTGGATTCGGGTTCTTCAGAGGGCGATATCGAAGACTCTGTCTCGTGGGCAGAACTCAATCGTTGCTCCGATCAAAGGTGTGATGGTGAAGGAACCAGAGTGGATGGTTTTAGCGGAGAAGCACAATGAGAATTTGACGGTGAGTAGTGTTAATTTGAGCAGTGAGGGTAGTTTGGAAGATGATGATTCAATGGAAAGTCAGAATCTTCAGTGGGCTCAGGGGAAAGCAGGGGAGGACCGTGTTCATGTTGTGGTGTCAGAGGAACACGGTTGGGTTTTCGTGGGGATCTACGATGGTTTCAACGGTCCTGATGCACCTGATTATTTGCTTTCAAATCTTTACACCGCCGTGCACAAGGAACTGAAGGGGTTGCTGTGGGATGATGGGTCTGCGCCAGAGAATTCGAATTTGGAAGCGCAAGATTCGATTCCAATCGGTGATGTTGTTGGGAAAGAGGACAGGTTGGGAGATGCTTGTTCTCAGTGTGTTGAGCAAGAGAATAACAATCGTGGTTGCGCAAGTGGTGGTGGGGATGCGGTTTTGAAGAGAAAAAGAGGTAAGAATTCCAAGAACAAGTACAAAGGTGGAGTGAGGAAAAGAGAGGAGAATCAGAGGAGGTGGAAGTGTGAATGGGATCGAGAAAGATTAGAGCTTGATAGAAGATTAAAGGAGCAACTAAGTCTAAGTCGATCTGGGTCTGCTTCCACTACCTCTATCAATCATGCAGATGTGTTGGAAGCTCTCTCTCGAGCTCTCAGGAAAACGGAGGAGTCTTATCTTGATGTTGCGGATAAGATGGTCACGGAAAATCCTGAACTTGCTTTGATGGGTTCATGTGTTCTTGTGATGTTGATGAAAGGGGAAGATGTTTATGTGATGAATGTGGGAGATAGTAGAGCTGTGTTGGGTCAAAAGGCTGAGCCTGATTACTGGCTTGGGAAAATTAGACAGGACTTGGAGAGGATCAATGAAGAGACAATGAATGATCTTGAATCATGGGATGCTGATACATCAAACGTGGTTCCCAGTCTAAATGCCTTTCAGCTTACCAAGGATCACAGTACCAATGTGGAAGAAGAAGTCCTCAGAATAAAAAAAGAGCACCCTGATGATCCTTGTGCTGTAGTAAATGATCGTGTGAAGGGTTCTCTCAAGGTTACCCGAGCATTTGGTGCCGGATTTCTCAAACAGCCCAAGTGGAACAATGCACTTCTGGAGATGTTTAGAATAGACTATGTAGGAAATTCTCCTTACATAAGCTGCTTGCCATATCTAAAACACCACAGATTAGGCCCAAAGGACAAATTTTTGATTCTATGCTCTGATGGGCTCTATCAGTACTTGTCAAACGAAGAAGCAGTAGCTGAAGTTGAGCTTTTCATCACGTTACAACCTGAGGGAGACCCGGCTCAGCATTTGGTTGAAGAAGTGTTATTTCGTGCTGCAAAGAAAGCTGGTGTTTGGACTTTCACGAATTGCTCGAAATTCCACAAGGTGATAGGCGTCGTTACCATGATGATGTTTCCATCATAG 2115 0.4757 MGNGIGKLTVCFTGNGGGGGGRKQDISFLITEPLDEGLGHSFCYVRPDPTRISSSKVHSEETTTFRTISGASVSANTSTPLSTAFVDLYSYGCIDRAAAFESSTSFASLPLQPIPRNMMNSGPFSGNLGGGFPSSGPLERGFMSGPIERGFMSGPIDRGLFSGPMEKDSSDQFQRSFSHGGLGFTVRPRSRKGRWIRVLQRAISKTLSRGQNSIVAPIKGVMVKEPEWMVLAEKHNENLTVSSVNLSSEGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYTAVHKELKGLLWDDGSAPENSNLEAQDSIPIGDVVGKEDRLGDACSQCVEQENNNRGCASGGGDAVLKRKRGKNSKNKYKGGVRKREENQRRWKCEWDRERLELDRRLKEQLSLSRSGSASTTSINHADVLEALSRALRKTEESYLDVADKMVTENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLGQKAEPDYWLGKIRQDLERINEETMNDLESWDADTSNVVPSLNAFQLTKDHSTNVEEEVLRIKKEHPDDPCAVVNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGNSPYISCLPYLKHHRLGPKDKFLILCSDGLYQYLSNEEAVAEVELFITLQPEGDPAQHLVEEVLFRAAKKAGVWTFTNCSKFHKVIGVVTMMMFPS. 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03658 704 Gene3D - 232 690 IPR036457 -
Seca3g03658 704 Pfam Protein phosphatase 2C 434 670 IPR001932 -
Seca3g03658 704 PANTHER PROTEIN PHOSPHATASE 2C 252 676 IPR015655 GO:0004722|GO:0006470
Seca3g03658 704 SMART PP2C_4 256 699 IPR001932 -
Seca3g03658 704 SUPERFAMILY PP2C-like 269 674 IPR036457 -
Seca3g03658 704 CDD PP2Cc 412 672 IPR001932 -
Seca3g03658 704 ProSiteProfiles PPM-type phosphatase domain profile. 255 704 IPR001932 -
Seca3g03658 704 MobiDBLite consensus disorder prediction 365 393 - -
Seca3g03658 704 Coils Coil 510 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03658 Seca-Chr3 65969685 65973285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03658 1 696 PP2C-type Phosphatase Gene Family AT1G07630 67.232 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03658 - - gmx:100812903 1128.62