Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03657 ATGGGAAAGCATTTGCTTTCTTTCCAGAATTCCACTGTTCAATTTCAGGATAATCATCCAGGATGCATGTGGGGCATACTTCAAATTCTTGACTACCATCATTGGCACTATTTCAGAAACGTGTTCCCTCACAAAAAGCATCACTCAAGAAGACATGCCAGATATAAAAGAAAAAAGCTTTTGCATAACCATGACGAAGACCATCAATTTGGAATTGCAGAAGAAGAACCCCTCTTATTGAGGCAACACAGCCAAAAATTGAATGCTACAACCAAAAGTTCTCCCAGAAGTAGCAAAAAAGGATCACGAACTGAAAATGGTTCTAAAGAAAAAAACTCCAAAGATTGGATCATTAGCTTTCACCATGAATCTCAACATTTGGAGTCTTCACATAAATGTGACAAGTGTAAAGCATATGGTGCCAAGGGGAAAATGGACTACTCAGAGCAAAACCAGGCCACAAATGAGCATGCACTTCATCTGGAGAAAAATGGCAACACAACAGAAGCTACCCTTAACCAAAAGCTTATGGAAGCAAAGAAATTTGACCATCTTGATGTTTTGGAGGTATTTAGAGTGGATAAGGATTTATTTCTGGAATTTTTACGAGATCTAGATGTTGGTGGGAAAAACTTTCATCAGGCTTCTAATAACAAAGCAAGATTGACAAAATCAGGGTCATTTCCTCTAACTTCACAGATGAGAAACATTAGTCCTAGTACCTTCAAACACAAGCAAAACGAAATTTGGGCCTTTCCCAAGGGGCAAAAGTTGCTAGCTGGTACTCAAGCACAAAAATTATTTGCATCCAGTTCTGCAAAAGACATTTCTTTTGTGAAACCAGTTCCTTTGGAGAGTGATCTTAGTGTGGACAGTGACATGAAACAAAAACCAGGCTTTTCTTCTTCAAGCTATTCTCAAGGATTAAATCACAAAGGGTGGAATCAAATGGTTCTTCATCGTTTCAAAATTATAAAACAGAAGATAAAACATGCTATTATGGACTTCAAGAAAAGCAGTTACCAAACTTCTGTTGAAACTATCCACCACAAAGCTTCATCTGAATGTAGGATTGTCAATAATGAGAAGGAGGAGTCACCAAGCTTAGATTTTGGCGTGATTCAAGAGTATATAAAGAATACAAGCTCAGATGAGACTGAAGCTCGCCTCATGAGAAGAGCTTCCTCTCTGAATGAGTCTATGGATAGATACATTTGGTTGTTTGAGCAAAGCTTCAACAAAGACATCAAGTGGCACAACTCAATGTCTAAAAGCTTGAAATTGGCAAATGAGGATAAGGATAACATGAGTGGTTGTGCTTCGAAGTCTTCCAGAAGGAATTTGTCTCTGCCTAATCTTGAGTCTTTAAGCTTCCTTGTACATGAGGCACTTTCTGATACAGATGATATGGGGATCACAGTGGAAACTGATATTCATATTCAAAGAAAATCAGTCAGTGTTCCTTTAGATAGAGACAAGTCACTAGATCATCTTACAGAGACTGAAATGGTGGAAACAGTAGAGAAATGTGGCAGGGATGTGAATCATAGTCCTTTATCTGGTAAGATTGCAGTTGGAGATGGAAGTTGTCCAGTTCCCCAAGAAAAAGTGGAAACAAGCATGACTATCTATCCTAGCAAGGAGGCAATAATGGCAACTCCTGAATCAAGCTATGATTGCAATAAAATCAGTCATGCAGAAGGTAGAGAATTAAGTACCAGAGGATCTAGCATGGATGGGTTATTGACTGAGTTACCAAATAAAGCAAGTGTATATTCTTGGCCTAGCTCTATAAGCAACACAAATGCTAGCGCAACAGCTAAAGCCCCAAAAATCAGTGATTCCAATTTCAAATATGTGAAAGATGTTCTTGAATTTTGGGGCATCAGGGGAAATGAGGAAATTCTAATGTGGAATACGGTAGACCAGCCACTAAAGCCCTCCTTACTAATGGATTTGGATCCAACTTTGTTCAATAAAATTGAATCCTCTGGAGAAGAGAGTATCAGCCCCTATCATTACCATTACCAGCTTCTTTTTAATGTAGTTAACGAAATTCTTCTTGAAATATATGAGAGATCACCAACTCACTTGCCAAGACCCTTCTTTAACAACTGCCTCCGTTCAATGCATAGGGAGAACTATCTTCTAAATGAAGTGTGGACTAGAGTTAGCTCATACCTGAGCTTGAGGCCAGAGCTAGATAGGACATTAGATGATGTTGTGGGTCGAGATTTGGCAAATGGTAGAGGGTGGATGAACCTCAAACAAGAAGAGGAATGTGTAGCTCTTGAACTAGAGGAGATAATTTTTGAAGATTTATTCAATGAAGTTATCTTCTCATGA 2346 0.3866 MGKHLLSFQNSTVQFQDNHPGCMWGILQILDYHHWHYFRNVFPHKKHHSRRHARYKRKKLLHNHDEDHQFGIAEEEPLLLRQHSQKLNATTKSSPRSSKKGSRTENGSKEKNSKDWIISFHHESQHLESSHKCDKCKAYGAKGKMDYSEQNQATNEHALHLEKNGNTTEATLNQKLMEAKKFDHLDVLEVFRVDKDLFLEFLRDLDVGGKNFHQASNNKARLTKSGSFPLTSQMRNISPSTFKHKQNEIWAFPKGQKLLAGTQAQKLFASSSAKDISFVKPVPLESDLSVDSDMKQKPGFSSSSYSQGLNHKGWNQMVLHRFKIIKQKIKHAIMDFKKSSYQTSVETIHHKASSECRIVNNEKEESPSLDFGVIQEYIKNTSSDETEARLMRRASSLNESMDRYIWLFEQSFNKDIKWHNSMSKSLKLANEDKDNMSGCASKSSRRNLSLPNLESLSFLVHEALSDTDDMGITVETDIHIQRKSVSVPLDRDKSLDHLTETEMVETVEKCGRDVNHSPLSGKIAVGDGSCPVPQEKVETSMTIYPSKEAIMATPESSYDCNKISHAEGRELSTRGSSMDGLLTELPNKASVYSWPSSISNTNASATAKAPKISDSNFKYVKDVLEFWGIRGNEEILMWNTVDQPLKPSLLMDLDPTLFNKIESSGEESISPYHYHYQLLFNVVNEILLEIYERSPTHLPRPFFNNCLRSMHRENYLLNEVWTRVSSYLSLRPELDRTLDDVVGRDLANGRGWMNLKQEEECVALELEEIIFEDLFNEVIFS. 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03657 781 MobiDBLite consensus disorder prediction 98 114 - -
Seca3g03657 781 PANTHER PROTEIN TRM32 1 781 IPR044257 -
Seca3g03657 781 MobiDBLite consensus disorder prediction 86 114 - -
Seca3g03657 781 Pfam Domain of unknown function (DUF4378) 617 777 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03657 Seca-Chr3 65925462 65930559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03657 185 771 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 27.243 1.94e-36 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03657 - - gmx:100784103 773.467