Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03655 ATGTTGCTGTGTTTTAAGTTTGGTGGGTTGTTAAAAAGGGGCTATCTTTATTGGGGTTTGTCTCCCTCTTGCATTTCTAGTTTTCAGGGGCATAAGGAGTGGATTAATGAAGTGAATTTATTGGGGGTAATCAAGCATCCAAATCTGGTGAGGTTAGTGGGTTACTGCGCAGAAGATGATGAAAGAGGGATTCAACGACTTTTGGTGTATGAGTTTATGCCTAATAAGAGCTTGGAAGACCATCTTTTGGCTCGAGTAACCTCCACACCTCTTCCATGGACGACAAGATTGAAAATTGCTCAAGATGCTGCTCGTGGTTTGGCATACCTGCATGAAGAAATGGATTTTCAGCTAATATTTCGAGATTTTAAGACATCCAACATCTTGCTGGATGGGGACTTTAATGCAAAACTTTCCGATTTTGGACTTGCTAGGCAAGGACCCTCAGAAGGGTCTGGCTATGTTTCAACAGCAGTTGTTGGCACCATAGGTTATGCAGCACCAGAGTATGTTCAGACTGGTAAGCTGACTGCTAAGAGTGATGTCTGGAGCTTTGGTGTAGTTCTTTATGAACTCATCACTGGGAGGAGAGCTGTAGAAAGAAACCTACCAAGAAGTGAACAAAAGCTTTTGGAGTGGGTAAGACCATATGTTTCTGATCCAAGGAAGTTCCATCTTATTGTAGACCCTAGACTTGAAGGACAGTATTGCATCAAATCAGCTAATAAACTTGCAATCCTAGCAAACAAGTGTCTCATGAAGCAGCCAAAGTCTCGTCCAAAAATGAGTGAGGTGGTTGAGATTCTTGGAAACATAATTAGTGAGACAGTTCCTCAGGATGAATGCATCCCCCAAGCAACTGGAGAAGAAAAAGAAGTGAAGTTATCTGTAGAGGAGGACACTGAAGCTGAAACTGAACCAACTAAACAGGGGAATAATTATCTGAAGAAGGTTCTTGAATTCAAAGACATGGTCAGCTTAAGAAATAAATCTATTGGAAGGTTGGATTGGAAAAGTTGGGCGCCTGGGCTAGTAAGAACTTGGTGA 1047 0.4193 MLLCFKFGGLLKRGYLYWGLSPSCISSFQGHKEWINEVNLLGVIKHPNLVRLVGYCAEDDERGIQRLLVYEFMPNKSLEDHLLARVTSTPLPWTTRLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDGDFNAKLSDFGLARQGPSEGSGYVSTAVVGTIGYAAPEYVQTGKLTAKSDVWSFGVVLYELITGRRAVERNLPRSEQKLLEWVRPYVSDPRKFHLIVDPRLEGQYCIKSANKLAILANKCLMKQPKSRPKMSEVVEILGNIISETVPQDECIPQATGEEKEVKLSVEEDTEAETEPTKQGNNYLKKVLEFKDMVSLRNKSIGRLDWKSWAPGLVRTW. 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03655 348 Pfam Protein kinase domain 31 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g03655 348 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 73 282 - -
Seca3g03655 348 SUPERFAMILY Protein kinase-like (PK-like) 28 269 IPR011009 -
Seca3g03655 348 Gene3D Phosphorylase Kinase; domain 1 20 73 - -
Seca3g03655 348 PANTHER OS01G0588500 PROTEIN-RELATED 27 271 - -
Seca3g03655 348 Gene3D Transferase(Phosphotransferase) domain 1 74 290 - -
Seca3g03655 348 ProSiteProfiles Protein kinase domain profile. 1 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03655 Seca-Chr3 65911568 65915216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03655 26 304 Glycoside Hydrolase AT3G07070 48.070 6.11e-82 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Seca3g03655 Pkinase 5.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03655 - - gmx:100305425 563.918