Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03640 ATGGATCCAAACTTTCCTGGAGTTAACGATTTCACGAACGGCTACCAATTTGGTGAAGAAGGGAGCATACTAGTCTCGGATCCAAATCAATACTGGGATGTGTACCAACAATATGGGAGCCTCCTTGATGTGGACCCAATTGGTGCATCTGTTGCAACCTCTGTAACAGATCCTTCCTCGGAAGACAACGACTTTGCAGAAACCGCAAAGTTCATAACCCAAATCCTGATGGAAGAGAACGTTGAGCAGAGACCGTTTTATGACTCGCTTACCTTGCAAGTCACAGAGAAATCATTCTTCGACGCTCTCACAGACAAAGCACCTTTTTCCCCAAATCAACACCCTTACAGTAACAGTAACAGTAGCAGCAGCAGCAGCAACAGCGCCAACAACGACAATTCTCGTGAGTTCAAGCCCCCTTCTCCCGATACCCTAGATTCTGTTTTTGCCTCTCAGTTTAACTTCTCTCAACCTCCTTCTAATGGACTGTTAGATTTTGATCCTTCTATTACCAAAATATTGGCACAAAATATTTTCAGTGATGTTGACTCTGTATCACAATTTAGGAGAGGGTTAGAGGAAGCTAGCAAATTCCTCCCTCCTGGACCTAGGCTTGTGACTGGTTTTGAGTCAAAGGGGGTTAGGGAGAATTCATTTGGGTTTAGGGGTAGAAAGAATCACGAGCGTGAAGAAAGTGATACAAATGAAATAGGTAGAAGTAACAAACAATCAGCAATTAGTGTTGTTGATGAGAGTGACTTATCTGATATGTTTGATCGAGTGTTGCTCAGTGTGGAACACTTGCCACTCTGTAAAGATCACGATTGCTTGCAGAATGAACCAGTGAAAGCTGAGCAACCAGTTGAAAAGCCACCTTCATCTAATGGAGGAAAGGCTCGTCCTAAGAGACAAGGAAGGAAGAAGGAAACGGTAGATTTGAGGGCTCTTCTGCTTCTATGTTCACAAGCTGTGTATACCAGTGACAACAGGACTGCTAATGAACTACTAAAGCAGATAAGGCAACATTCTTCTGAGTCAGGGGATGCATCACAGAGATTGGCTCATTACTTTGCAAATGGCCTTCAGGCACGCTTGCTTGGTGATGGTACTGTTGCACAGATATTTTATTCCTCTCCAAGCTCCAAGAGGATCAGTGCTGCTGATTTTTTGAAAGCTTACAAGGTTTTCCTATCTACTAGCCCATTCAAGAAGTTTTCATATTTCTTTGCTAATAAAATGATCATGAAAGCAGCTACAAAGGCAGAAACACTTCATATCATTGATTTTGGTATCCTGTATGGTTTCCAATGGCCAATACTTATTAAGTTTCTGTCAGATAGAGATGGTGGACCTCCCAAGCTGAGGATCACAGGGATAGATTTTCCCCAACCTGGATTTCGTCCTACAGAAAGAATTGAGGAGACTGGTCGTCGTTTGGCTAACTATTGCAAGCGTTTTAATATTCCCTTTGAGTACAATGCCATAGCCTCAAGGAACTGGGAAACCATTCAAGTTGAAGACCTTAAAATTGAGAGCAATGAGGTAGTTGCTGTGAACTGTTTGATGAGGTTCAAGAATTTATTGGATGAGACTATTGAAGTGAACAGTCCTAGAAATGCAGTTCTGCATTTGATCAGGAAGATCAATCCGGATATTTTTACTCAGTCCATTGTTAATGGATCTTATAATGCCCCTTTCTTTGTCACGCGGTTTAAGGAGGCTATGTTCCATTTTTCTGCTTTCTATGATATGTGTGACACTGTCATACCCCGTGAAAACGAATGGAGGATGATGATTGAGAGAGAGATTGTGGGTAGGGAGGCTATGAATGTTATAGCATGTGAAGGTTATGAGAGGGTTGAGAGGCCTGAGACATACAAACAGTGGCAGGTTAGAAATACGAGGGCTGGTTTCAAGCAGTTGCCATTGAATGAGGAATTGATGACCAAATTTAGGACTAAGTTAAGGCAATGGTACCACAGAGATTTTGTCTTTGATGAAGACAACAACTGGATGCTTCAAGGTTGGAAGGGCCGCATTTTGTATGCTTCCACTTGTTGGGTGCCAGCATAA 2073 0.424 MDPNFPGVNDFTNGYQFGEEGSILVSDPNQYWDVYQQYGSLLDVDPIGASVATSVTDPSSEDNDFAETAKFITQILMEENVEQRPFYDSLTLQVTEKSFFDALTDKAPFSPNQHPYSNSNSSSSSSNSANNDNSREFKPPSPDTLDSVFASQFNFSQPPSNGLLDFDPSITKILAQNIFSDVDSVSQFRRGLEEASKFLPPGPRLVTGFESKGVRENSFGFRGRKNHEREESDTNEIGRSNKQSAISVVDESDLSDMFDRVLLSVEHLPLCKDHDCLQNEPVKAEQPVEKPPSSNGGKARPKRQGRKKETVDLRALLLLCSQAVYTSDNRTANELLKQIRQHSSESGDASQRLAHYFANGLQARLLGDGTVAQIFYSSPSSKRISAADFLKAYKVFLSTSPFKKFSYFFANKMIMKAATKAETLHIIDFGILYGFQWPILIKFLSDRDGGPPKLRITGIDFPQPGFRPTERIEETGRRLANYCKRFNIPFEYNAIASRNWETIQVEDLKIESNEVVAVNCLMRFKNLLDETIEVNSPRNAVLHLIRKINPDIFTQSIVNGSYNAPFFVTRFKEAMFHFSAFYDMCDTVIPRENEWRMMIEREIVGREAMNVIACEGYERVERPETYKQWQVRNTRAGFKQLPLNEELMTKFRTKLRQWYHRDFVFDEDNNWMLQGWKGRILYASTCWVPA. 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03640 690 MobiDBLite consensus disorder prediction 282 308 - -
Seca3g03640 690 MobiDBLite consensus disorder prediction 110 143 - -
Seca3g03640 690 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 239 683 IPR005202 -
Seca3g03640 690 MobiDBLite consensus disorder prediction 217 243 - -
Seca3g03640 690 Pfam GRAS domain family 313 687 IPR005202 -
Seca3g03640 690 ProSiteProfiles GRAS family profile. 304 688 IPR005202 -
Seca3g03640 690 MobiDBLite consensus disorder prediction 217 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03640 Seca-Chr3 65666285 65668426 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03640 70 690 GRAS Transcription Factor Family AT1G07530 48.551 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Seca3g03640 GRAS 3.4e-115 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03640 - - lja:Lj0g3v0300259.1 962.6