Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03630 ATGGTCTTCTTTCCTTTGGACTTCAGTGATCAAGAGTTGCAAAGCTCTCTTCATCCGCTCAGATCTGGCCCCGGTCATTGGACCTTCAATCCATTGCAATGGATCCGAGGCATCCTGGTTGAGGTATTGCCTCTCTACAAAAATCAGCAATTCAATTTGAACTTTTTGAGAAAGCTTGAATGGTATTTAACCGTTCCCACACCCTATGTCTTCTTGGTTCGATATATAAAAGCCTCCACTCCCTTTGATAAAGAGATGGAAAACATGGCTTTTTTCCTTGTTGAACTTGGTTTGATGCACTATCTTGTTTTGTCCTTGTATTGTGCTTCTGTGATTGCTACTTCTGTTGTATATGCAGCAAGATGGATTGTGCCAAACTGTTGGTTAACCTTCATTCAACTGCTCCAGAAACTAGGGGTGTTCGCAGATTGGATTGGATTGGTTTTGAAGGAAAAATCATCCAATCCGATCATTTCGGTTTTGCTACTTAGTCATCCAATCGTGTTTGTTACTGGTTTATGGTCCTGTGGCATTTTGGCAATACTTGGATATGTGGCAATACTTGGAGAATTCATTCGTGCCTTCTTGCATTTGCTCTCTGTCGTCAACCCCCTCACTCTTTGTCGTCAACCTCCTCACGCTCCCAGGTACACATTCTTCTCACCATTCTTTTATCTTGCTTCGTTTTTAGCCATGTCTGTTTCAAGAGAGACTTCTGAGTTTTCCGGTGAGGGTTCCGATGGGGGGAGTTGCCATTTTCGTGCACAATCTGTTTATGTTTTAAGTTCTTCAGACAGTACTGAGACCGATCCTCTTAGTGAGGATTTAGGTCATGAAGTTAAGAGAAGGAGGAGGAAGAAAGTTCTGAAATATCCGGGGGAAGGCGAATTAGAGGGTTACATCCTAAAGGTTGATGAGGGTGAGGGAGAGGAAACCGGGTATGATTTTGAGGGTTTTTCCTGGGTAACCGAGGAGGTTCGGGATACCTCTTCGGTATATACTGACGAGCAATCTCTTCAAAAATTCATTAGTCGAGTAGACGTCACCCGACCTAGCACCAAGGGCTCCATAAACTGTAGCTGGTGTAATCCGGGTGATAGGATTTGTCATAGGCGTGCTGCTAACTCGGTCCATGATGTTGTCTATATGTTTGACAAAATGTTTAGTCAGTTCAATGTCCGAGTTCCCTTTACTGATTTTGAATGTTCTCTTCTCCGTCTTCCGGTTGTTGCTCCTACCCAGCTTCACCCTAATTCTTGGGGCTTTTTCAAAGAAACTATGGCTACTGCTCTAGATAGAAAGACGTTGACCCGTCGGCTTGCAGCTCAACGAGCCAAGAAAGCGAAGGCCGAGGCGGCTAAGACGGAAGCTGCTAACGCCGAGAAGACCACCGGAGGGGCCAACTCTGATGTAAAGGTTTCAAATCCACAGATGATATCTTCAGAAAAGGTCCCCTCTTCGTCATCTTTGAAAGAAGTTTCCCGAAAACGTCCGCGGGAATTGACTCCACGTTTAGACGTAGAGAAGAATGTTGGGCCTGAGTTACCCACCGAAGGCGTTGGTGTTCAGGTGTTTCAAGATTTTACTGGATCGGGACCCACTATATGTTCTTTGTGGGACAATCGGTTCGACGTTCACCAAGTCATAGATAATAATCTCCTTTTAAAGAGCGATGTGAAGTATTTGGACAAGTGGGGTCCACGCTCTGCTCACCTAATGCTTCAACATATCGGTGTTAGGACTGCTGCCTTAGCTCGGTATCTGGAAAGGAAAGATTCTTCAAATTCAGCTCGACAATCTGAATTGCTTAAGTCTGTTGACGACCTACAAAAGCATCTCGTTGGATATGAAGAGATGAAGACTAAGGTAGCAGGGCTGGAGGGCCGAGTTGTTCTTTTGACTAAGGAAAATGAAAATTTGAAGGAAGAGAAGGAGACTCTGTCTGTAGAGGTGAATACCGAGAAGACTTCCAAAGAGAACCAAGAAACTGCTTTCTGA 1998 0.4454 MVFFPLDFSDQELQSSLHPLRSGPGHWTFNPLQWIRGILVEVLPLYKNQQFNLNFLRKLEWYLTVPTPYVFLVRYIKASTPFDKEMENMAFFLVELGLMHYLVLSLYCASVIATSVVYAARWIVPNCWLTFIQLLQKLGVFADWIGLVLKEKSSNPIISVLLLSHPIVFVTGLWSCGILAILGYVAILGEFIRAFLHLLSVVNPLTLCRQPPHAPRYTFFSPFFYLASFLAMSVSRETSEFSGEGSDGGSCHFRAQSVYVLSSSDSTETDPLSEDLGHEVKRRRRKKVLKYPGEGELEGYILKVDEGEGEETGYDFEGFSWVTEEVRDTSSVYTDEQSLQKFISRVDVTRPSTKGSINCSWCNPGDRICHRRAANSVHDVVYMFDKMFSQFNVRVPFTDFECSLLRLPVVAPTQLHPNSWGFFKETMATALDRKTLTRRLAAQRAKKAKAEAAKTEAANAEKTTGGANSDVKVSNPQMISSEKVPSSSSLKEVSRKRPRELTPRLDVEKNVGPELPTEGVGVQVFQDFTGSGPTICSLWDNRFDVHQVIDNNLLLKSDVKYLDKWGPRSAHLMLQHIGVRTAALARYLERKDSSNSARQSELLKSVDDLQKHLVGYEEMKTKVAGLEGRVVLLTKENENLKEEKETLSVEVNTEKTSKENQETAF. 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03630 665 Pfam Cyclin, C-terminal domain 66 124 IPR004367 -
Seca3g03630 665 MobiDBLite consensus disorder prediction 642 657 - -
Seca3g03630 665 SMART Cyclin_C_2 66 164 IPR004367 -
Seca3g03630 665 Coils Coil 433 463 - -
Seca3g03630 665 Coils Coil 616 657 - -
Seca3g03630 665 Gene3D - 53 138 - -
Seca3g03630 665 MobiDBLite consensus disorder prediction 447 502 - -
Seca3g03630 665 MobiDBLite consensus disorder prediction 642 665 - -
Seca3g03630 665 SMART cyclin_7 70 154 IPR013763 -
Seca3g03630 665 SUPERFAMILY Cyclin-like 67 125 IPR036915 -
Seca3g03630 665 MobiDBLite consensus disorder prediction 461 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03630 Seca-Chr3 65528712 65536669 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03630 54 124 Core Cell Cycle Gene Families AT2G26760 56.338 7.50e-20 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03630 K21777 - rvl:131312523 107.842