Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03629 ATGCTCTCTACGGATTCCCTTCTGGAAAATTTTGCTGGTTCCGTGAATGGATGCTTATTTGGAAAGGGTCCTATCTCGGTATTTTCCAACCAGAACCCAGGAAATGGGTTCAAGTTGAAAGATTCATCATCATCCCCTTCAAACCATTCAGAATCTGTCTGTGATTCTGGTATTACTTCTGGCACAAGCTCAAATGGAGAATCTTCTGAGTCAGAGAGTAGTAAATATTCCAATCCCATTCTCAGATACATAAGCGACATCCTCATGGATGAAGAAGATGACTTGGAGCGCAAACCCTGCATGTTGCAGGATTGTTTGAGACTCCAAGCTGCTGAAAAATCATTCTATGATGTTCTGGGTCGTAGCTATCCTTCATCACCCCACCAAATCGATGGTTGTTACCGTGATGATAACCCTTACCCAGATGATAATTTTGGTGGAAGAACTACTAGTTCTGAGAGCTATAACAGTTATACCACTGATAATTCATATGAGTCTGAGTGGGTTAATGGTGCTGGTGATTTTGAGTCTTCTTTCCTGCAAAGATCTCTAGTTGATTCCCCAGAAAACACCTATGAGTTTCTGGATGGAGTATTACCTCCTGATCCATTTAGACAGACAAAAGCTGGTATCCATTTTTCAAATGGAAACTGGAATATGATTCACTCTCAGAGAAAGCTATATATAATTGAAGAGGGTCTGATGAAGGGTTCCACAGTAGCCAGAGGGTCAAGGGAAAAAAGAGGCCATCTTTTGAATGATATCTCACATGAAGAAGAAGAGAGAAGCAGCAAACTTTCAGCTGTTTACTCTGATGATTCAGAACCATCAGACATGTTTGATGAGGTACTGCTTTGTAGGGATGGTAAAAGTCCAGCCATTTTTTGTAATAGTCGTGAACCATCATCTCAGATTGCTGATCCAGGAGGGTCTAATGGAAAGACAACACGTTCTAAGAAAGGTTCCAACAAAGGGACAAATACTAGTACACCAGTAGATTTATGGACTCTGCTAACTCAATGTGCACAGGCTGTGGCTAGTTATGACCAAAGGACTGCAAATGAAACACTGAAGCAGATTAGGCAGTACTCTTCACCACTTGGTGATGGAATCCAGCGTTTGGCTAGTTACTTTGCTGATGGGCTTGAGGCGCGATTAGCTGCTGGTACACCAAAGTATAAGCTCCTTCAATCTGCATCTGCTGCAGATATGTTGAAAGCTTACAAAGTGTACATCACAGCATCTCCATTTCCAAGGATGTCAAATTTCTTGGCTAACAGAACAATTCTAAAACAAGTACAAAATGAAAGCAGTCTTCATATTATTGACTTTGGGATTTTCTATGGTTTCCAATGGCCTTGCCTCATCCATCGTCTTTCAGAAAGACCAGGTGGACCTCCAAGGCTTCGTATTACAGGAATTGATCTCCCTCAGCCAGGATTTAGGCCTACAGAAAGAGTTGAGGAGACAGGGCGGCGACTTGAGAAGTACTGCAAGAGATTTGGAGTTCCATTTGAGTACAATTGCCTTGCACAGAAATGGGATACTATAAGACTTGAGGACCTCAAAATTGATAGAGAAGAAGTGACTGTAGTGAACTGTTTGTACAGATTGAAGAACCTATCTGATGAAACTGTGACTGCAAACTGTCCAAGAGATGCTGTGTTAAGGTTGATCAGGAGGATTAATCCAAAAATCTTCATACATGGGGTTGTCAATGGCACTTACAATGCACCATTTTTCCTGACTCGGTTTAAGGAGGCACTCTTCCACTTCTCATCATTGTTTGATATGTTTGAGGCTACTGTGCCTCGTGAAGATACATCTAGGTTGATGTTTGAGAAAGGATTATTTGGAAGGGATGCAATCAATGTCATAGCATGTGAAGGGGCAGAGAGGGTTGAAAGGCCAGAGACTTACAAGCAGTGGCAGGTTAGGAATCGTAGAGCAGGGTTCAAGCAACTTCCATTGGCCCCAGAACTCTTGAATAGAGTGAAAGAAATGGTGAAGGAGGAGTATCATAAAGATTTTGTAGTGGATGAGGATGGCAAGTGGGTTTTGCAGGGATGGAAAGGGCGTATTCTTCATGCTGTTTCTTCTTGGGTTCCTGCTTAA 2115 0.4213 MLSTDSLLENFAGSVNGCLFGKGPISVFSNQNPGNGFKLKDSSSSPSNHSESVCDSGITSGTSSNGESSESESSKYSNPILRYISDILMDEEDDLERKPCMLQDCLRLQAAEKSFYDVLGRSYPSSPHQIDGCYRDDNPYPDDNFGGRTTSSESYNSYTTDNSYESEWVNGAGDFESSFLQRSLVDSPENTYEFLDGVLPPDPFRQTKAGIHFSNGNWNMIHSQRKLYIIEEGLMKGSTVARGSREKRGHLLNDISHEEEERSSKLSAVYSDDSEPSDMFDEVLLCRDGKSPAIFCNSREPSSQIADPGGSNGKTTRSKKGSNKGTNTSTPVDLWTLLTQCAQAVASYDQRTANETLKQIRQYSSPLGDGIQRLASYFADGLEARLAAGTPKYKLLQSASAADMLKAYKVYITASPFPRMSNFLANRTILKQVQNESSLHIIDFGIFYGFQWPCLIHRLSERPGGPPRLRITGIDLPQPGFRPTERVEETGRRLEKYCKRFGVPFEYNCLAQKWDTIRLEDLKIDREEVTVVNCLYRLKNLSDETVTANCPRDAVLRLIRRINPKIFIHGVVNGTYNAPFFLTRFKEALFHFSSLFDMFEATVPREDTSRLMFEKGLFGRDAINVIACEGAERVERPETYKQWQVRNRRAGFKQLPLAPELLNRVKEMVKEEYHKDFVVDEDGKWVLQGWKGRILHAVSSWVPA. 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03629 704 MobiDBLite consensus disorder prediction 245 268 - -
Seca3g03629 704 ProSiteProfiles GRAS family profile. 325 702 IPR005202 -
Seca3g03629 704 MobiDBLite consensus disorder prediction 297 329 - -
Seca3g03629 704 MobiDBLite consensus disorder prediction 245 276 - -
Seca3g03629 704 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 264 695 IPR005202 -
Seca3g03629 704 MobiDBLite consensus disorder prediction 37 75 - -
Seca3g03629 704 Pfam GRAS domain family 336 701 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03629 Seca-Chr3 65511946 65514060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03629 71 703 GRAS Transcription Factor Family AT2G29060 45.581 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Seca3g03629 GRAS 1.7e-114 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03629 - - lja:Lj3g3v3213190.1 1097.8