Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03594 ATGGCAGAGGAAGTTAAGCTTTTAGGCACATGGGCTAACCCTTTCTCTTGCGGAGTTGAGTTAGCGCTGAAATTGAAAGGGGTTGAATATGAATTCATTGAAGAAATCCTTGATAACAAGAGTCCACTGCTTCTCGGGTACAACCCAGACTATAAGAATAAGGTTCCTGTGCTTGTCCACAATGGGAAGCCTATAGCAGGGTTTCTTTTTATTCTTGACTATGTTGATGAGACTTGGGATCACCATCCCCTGTTGCCTTCTGATCCTTATGGTAGAGCCAAGTCACGCTTTTGGGCTAAATCCATTTATGAAAAGTTTATTGTTGTTTGTTTGCAGTTATTTTCAATTGGAGCGAAGGCCTTGTTTGGTAAAGGCACTAGAATGGAAGATGGCAAGATAGCATTTGATGAATTTGTGAAATTGCTGGAGAATGAGCTGGAGGGAAAGGACTTTTTTGGAGGTGACACCATTGGATACTTGGACATTGCTGCAATAATAATACCAATCTTGTTTGGAAGGGTCCAAGAAGTTTTAGGAATGGAGTTGGTGTCCCAAGACAAATTTCCCAACATTTTCAAATGGATTGAAAAGCTAAACAAAATTGATGTCTTCAACCAAACCTACCCTCCAAAAGACGTACACATGGTTTACATAAGGGCTCGCCATGAAGCCAATCAGGCTTCCAAATAG 690 0.4101 MAEEVKLLGTWANPFSCGVELALKLKGVEYEFIEEILDNKSPLLLGYNPDYKNKVPVLVHNGKPIAGFLFILDYVDETWDHHPLLPSDPYGRAKSRFWAKSIYEKFIVVCLQLFSIGAKALFGKGTRMEDGKIAFDEFVKLLENELEGKDFFGGDTIGYLDIAAIIIPILFGRVQEVLGMELVSQDKFPNIFKWIEKLNKIDVFNQTYPPKDVHMVYIRARHEANQASK. 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03594 229 CDD GST_C_Tau 89 221 IPR045074 GO:0004364|GO:0006749
Seca3g03594 229 SUPERFAMILY GST C-terminal domain-like 77 222 IPR036282 -
Seca3g03594 229 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Seca3g03594 229 Gene3D Glutaredoxin 1 84 - -
Seca3g03594 229 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 226 IPR010987 -
Seca3g03594 229 Pfam Glutathione S-transferase, C-terminal domain 137 200 IPR004046 -
Seca3g03594 229 SUPERFAMILY Thioredoxin-like 5 105 IPR036249 -
Seca3g03594 229 SFLD Glutathione Transferase (cytosolic) 2 227 IPR040079 -
Seca3g03594 229 SFLD Main.3: Omega- and Tau-like 2 227 IPR045073 -
Seca3g03594 229 CDD GST_N_Tau 5 79 - -
Seca3g03594 229 Gene3D - 85 229 - -
Seca3g03594 229 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 206 IPR045073 -
Seca3g03594 229 Pfam Glutathione S-transferase, N-terminal domain 4 77 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03594 Seca-Chr3 64938704 64939467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03594 2 223 Glutathione S-transferase Gene Family AT2G29420 46.188 1.09e-67 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03594 K00799 - pvy:116145023 244.202