Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03586 ATGGAAGGGATGACACCATCCTCATCTATGAATGGCACCATGAATATGGACAATAAGAGCATGATGCGCATGACCTTGTTCTGGGGAAAGAACACAGTGATTCTGTTCAACAACTGGCCTGCGGGAAAAGCTAACATGTACGCGTTGGCCTTGGTCATTGTGTTCGTCATTTCCCTTCTCATCGAGTTGCTCTCCCACGCAGGCCGGTTGATCAAACCCGGTTCGAACCGTGTTGTGGTCCGTCTGGTTCAGACTCTGCTGCACCTCCTCGGCGTTGGGCTCTCTTACTTGGTCATGCTAGCACTCATGTCTTACAATGGAGGAGTCGTCTTGGTTGCTGTGCTTGGTCATGCTCTAGGCTTCTTCTTTTGTAGCAGGGTTTTTACAAAACCGCGCCATGGATGA 405 0.5012 MEGMTPSSSMNGTMNMDNKSMMRMTLFWGKNTVILFNNWPAGKANMYALALVIVFVISLLIELLSHAGRLIKPGSNRVVVRLVQTLLHLLGVGLSYLVMLALMSYNGGVVLVAVLGHALGFFFCSRVFTKPRHG. 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03586 134 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 13 129 IPR007274 GO:0005375|GO:0016020|GO:0035434
Seca3g03586 134 Pfam Ctr copper transporter family 76 124 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03586 Seca-Chr3 64839928 64840332 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03586 26 132 Inorganic Solute Cotransporters AT3G46900 47.222 4.36e-30 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03586 K14686 - gmx:100306175 149.058